Triplophysa rosa: 130549193
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Entry
130549193 CDS
T09216
Symbol
cxcl12b
Name
(RefSeq) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
tros
Triplophysa rosa
Pathway
tros04060
Cytokine-cytokine receptor interaction
tros04672
Intestinal immune network for IgA production
tros04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130549193 (cxcl12b)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130549193 (cxcl12b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
130549193 (cxcl12b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tros04052
]
130549193 (cxcl12b)
00536 Glycosaminoglycan binding proteins [BR:
tros00536
]
130549193 (cxcl12b)
Cytokines and neuropeptides [BR:
tros04052
]
Cytokines
Chemokines
130549193 (cxcl12b)
Glycosaminoglycan binding proteins [BR:
tros00536
]
Heparan sulfate / Heparin
Chemokines
130549193 (cxcl12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
130549193
NCBI-ProteinID:
XP_057182393
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All DBs
Position
LG25:6659656..6667810
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AA seq
98 aa
AA seq
DB search
MDCKVLAVVTLLAVTIWSPETDAKPISLVERCWCRSTLNTVPQRSIREIKFLHTPSCPFQ
VIAKLKNNREVCINPKTKWLQHYLKNAINKIKAKKRSE
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggattgcaaagttctggcggtcgtgactcttttggcggtgaccatttggagcccggaa
actgacgcaaagcccatcagtttggttgagagatgctggtgccggtcgactctaaacacc
gtcccgcagcggagcatccgagagatcaagttcctccacacacccagctgccccttccaa
gtcattgccaagctgaagaacaacagagaggtctgcatcaaccccaagaccaaatggctg
cagcactatctaaagaatgccattaacaaaataaaggccaagaaacgttcagagtaa
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