Triplophysa rosa: 130549417
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Entry
130549417 CDS
T09216
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
tros
Triplophysa rosa
Pathway
tros04010
MAPK signaling pathway
tros04020
Calcium signaling pathway
tros04510
Focal adhesion
tros04540
Gap junction
tros04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130549417 (pdgfrb)
04020 Calcium signaling pathway
130549417 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130549417 (pdgfrb)
04540 Gap junction
130549417 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130549417 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tros01001
]
130549417 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tros04090
]
130549417 (pdgfrb)
Enzymes [BR:
tros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130549417 (pdgfrb)
Protein kinases [BR:
tros01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
130549417 (pdgfrb)
CD molecules [BR:
tros04090
]
Proteins
130549417 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
PKD
VEGFR-1-like_Ig-like
Haspin_kinase
RIFIN
Motif
Other DBs
NCBI-GeneID:
130549417
NCBI-ProteinID:
XP_057182615
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MTSFTLRLFQLTAMTIGVILLCSALEINPSVPEVILSTKSSLNITCSGWANVTWRFKREE
NVPHFHIKNQSPTSSVLSLENVTWRHTGVYACSENGTNDTRELTVFVPDPEAWFLYNDYV
MVTKTRKEGTIPCLVTDPRINVTLLEKDSEMPVEGSYNPSVGYTAALEDRTYKCRGELNG
QEKDSISFYVFTVMAPEALEPFINASRTVLKQGETLNVNCTVHDVELVFFSWNFPNKDAG
NIEPLTDVLSSMSMRSCLNITNVTLASSGEYVCHAHEGVENLRASANITITVLEKGFVDL
RSHLDRNMSAQLDENIELKVEMDAYPKPTVHWTKDGGVIHGENMRQTHETRFVSTLTLVR
IRLEQMGLYTVSAQNEDDFKNMTFDLEVKVPPQITQLSDHPLSGRRLAVICVAEAVPSPS
IQWFSCDSMHKCSNRSAVWSPLGEDPESITIQTNITYNSTRKIHQIHSQVTFLRPQLLTV
RCEARNERGARARDIRLVNSTLFSQVAVLAAVLALVVIAIISIIILIAVWRKKPRYEIRW
KVIESVSVDGHEYIYVDPIHLPYDLTWEMPRDSLLLGRTLGSGAFGRVVEATAYGLGRSQ
STTKVAVKMLKSTARKSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVTEYCRY
GDLVDYLHRNKHSILQYHTDKNHIANGNSGLLCNDADAVAGKEYVTFVSECDGGYMDMTK
DEEQTEYVPMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDRSLVISDSPVLSYIDL
VGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDNNYISKGNT
FLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRM
TKPTYATDDIYEIMKKCWDEKFEKRPEFSFLVHSMGNLLSDGYKKKYSQVSDSFLKSDHP
AVVRVKPRVSSSFSGTISPSGFPPGLLPDPTPRPQSDPHNEYIIPIPDPKPENDTEDVMV
PVESPLSSMSSDEETVSMETPSTEPEQKHHSGTPDVEESFL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtttcaccctccgtctgttccagctgactgccatgactataggcgtgattctg
ctctgctcagctcttgaaatcaatcccagcgttccagaggtcattctctccacaaaatcc
tctctcaacatcacctgctccggctgggcaaatgtcacctggcgcttcaaacgagaggag
aacgttccacacttccacattaaaaaccaaagtcccacctccagcgttctgagtctagag
aatgtgacttggagacacacgggtgtttatgcgtgttctgagaacggcaccaatgacaca
cgagagctgaccgtttttgtgcccgatcctgaggcttggttcctctacaacgattacgtg
atggtgactaagactcgtaaggagggaacgatcccgtgcctggtcacagatccacggata
aacgtcacactgttggagaaagacagcgagatgccggtggagggctcgtacaaccccagc
gtgggctacactgccgccctggaggacagaacctataaatgcagaggagagctgaacggc
caggagaaagactccatcagtttctacgtcttcactgtcatggctcctgaggctctggaa
cccttcatcaacgcctccagaactgtgctgaaacagggcgagacgctgaacgtcaactgt
accgttcacgacgtggagctcgtcttcttctcctggaattttcccaacaaagatgccggg
aatattgaacccttgacagatgttctgtcctcaatgagcatgcgctcttgtctcaacatc
acaaacgtcactctggccagctctggagagtatgtgtgtcatgcacatgagggtgtagag
aacctgagagcttcagcaaacatcaccatcactgttctggagaaagggtttgtggatctg
agatctcatctggacagaaacatgtcagcgcagctcgatgagaacatcgagctgaaagta
gagatggatgcataccccaaacccaccgtccactggaccaaagacggaggcgttattcac
ggggagaacatgagacagacacacgagaccaggttcgtcagcacattgaccctggtgagg
atccgactggagcagatgggtctctacactgtcagtgcccagaatgaagacgactttaaa
aacatgacctttgacctcgaggtgaaagttcctcctcagataacccaactctctgatcat
ccgctgtcggggaggagacttgcggtcatctgtgtagcggaggccgtgccgtctcccagc
attcagtggttcagctgtgacagtatgcacaaatgcagtaacagaagtgcagtatggagc
cctctaggggaggatccagagagcatcaccatccagacgaacatcacctacaacagcaca
cgcaagatccatcagattcacagtcaggtgactttcctccggccgcagctgctcaccgtc
cgctgtgaagccagaaacgagagaggagctcgagccagagacatcagactggtgaacagc
acattgttctcacaggttgctgttcttgctgctgttctggcactggtggtcattgccatc
atctccatcatcatcctcatcgctgtgtggaggaagaaaccgcgctatgaaatcagatgg
aaggtcattgaatcggtcagtgtggatggacacgagtacatttatgttgaccccattcac
ctgccgtatgacctgacgtgggagatgccacgagacagtctgttgctgggtcgtacgttg
ggttctggagcgtttggacgtgtcgtggaggcgacggcgtatggtctcggccgttctcaa
tccaccaccaaagtggcagtaaagatgctgaaatcgaccgctcggaagagcgagacgcaa
gctctgatgtctgaactgaagatcatgagtcatcttggtcctcatctgaacatcgtgaac
ctgctgggtgcctgcaccaaacaaggtccgctgtacctggtaacagaatactgtcgctat
ggtgatctggtggattacttgcacaggaacaagcacagcatcctccagtaccacactgac
aagaaccacatcgccaacggcaacagcggcctgctctgtaatgatgctgatgcagtggca
ggaaaggaatacgtgacgtttgtcagcgagtgtgatggaggatatatggacatgaccaaa
gatgaagaacagaccgagtatgttccaatgcaggagctcacggacactatcaagtacgct
gacatccagccgtcaccatacgagtccccttaccagcaggacatctatcaggagcaaggt
cacagagtggaccgctctctggtcatcagtgattctccggttctgagttacattgatctg
gtgggtttcagttatcaggtggctaaaggcatggagtttctcgcatcaaagaactgtgtt
catcgagatctggcagctagaaacgttttgatctgtgaaggcaaactggttaagatctgt
gactttgggctggccagagacatcatgcatgacaacaactacatctccaaaggcaacacg
tttctccctctgaagtggatggcaccagagagcatctttcataacttgtacaccacgctg
agtgacgtctggtcttatggcatcttactgtgggagattttcactctcggaggaactccg
tatccagacctgccgatgaatgaattattttacagcgctctgaagagaggttaccgcatg
accaaacccacatacgccacagatgacatctatgagatcatgaagaaatgttgggatgag
aagtttgagaaacgtccagagttctcctttctagtgcactcaatggggaaccttctgtcg
gacggatataaaaagaaatattctcaagtcagcgatagttttctgaagagcgatcaccct
gctgtggttcgtgtgaagccgcgggtttcctcatcgttttcgggcaccatctctccctct
gggtttcctccaggacttctgcccgacccaactcctcgtccacagagcgacccgcacaac
gaatacatcattcccatccccgacccaaagccagagaacgacactgaggatgtgatggtg
ccggtggaaagccccctgagctcaatgagctccgatgaggagacggtctctatggaaacc
cccagtactgaacctgagcagaaacatcattcaggaaccccagatgtggaagaaagtttt
ctgtga
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