Triplophysa rosa: 130550412
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Entry
130550412 CDS
T09216
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Pathway
tros04010
MAPK signaling pathway
tros04137
Mitophagy - animal
tros04141
Protein processing in endoplasmic reticulum
tros04210
Apoptosis
tros04217
Necroptosis
tros04621
NOD-like receptor signaling pathway
tros04622
RIG-I-like receptor signaling pathway
tros04920
Adipocytokine signaling pathway
tros05132
Salmonella infection
tros05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130550412 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130550412 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130550412 (traf2b)
09143 Cell growth and death
04210 Apoptosis
130550412 (traf2b)
04217 Necroptosis
130550412 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130550412 (traf2b)
04622 RIG-I-like receptor signaling pathway
130550412 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
130550412 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130550412 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
130550412 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130550412 (traf2b)
04121 Ubiquitin system [BR:
tros04121
]
130550412 (traf2b)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130550412 (traf2b)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130550412 (traf2b)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130550412 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-RING_4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
Paramyxo_NS_C
Toxofilin-like_dom
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
130550412
NCBI-ProteinID:
XP_057183856
LinkDB
All DBs
Position
LG2:complement(8051934..8081805)
Genome browser
AA seq
536 aa
AA seq
DB search
MLSTGDTVSKWKAMAHPSLPSSLDSTLPGICRDVLSVSMESKYQCQQCKEILRKPYQAQC
GHRFCVFCFKQLTSTGPTPCEACRAEGIFEESTSMLDITVAFPDNAARREIDSLPAKCPN
EGCSWNGLLKDYEGQHEGRCEFERVKCEACQALILLSEKDRHNERECEARTLNCKYCKVT
FNFKEIKAHDEICQKFPMQCKDCGKKKIPREKFQEHIKSCAKSKSACQFSEIGCRAVLDN
GKQQEHEQMSVIEHLRLMLGVLSTVRLRPETGGEWQEDSGLGLYRGPEDAPLVGAHAAAH
NVGRGGSPSVQHKVTALENIVCVLNREVERAALTLEALSRQHRIDQDKIENLSTKVRQLE
RTLTMRDLQLAESEQSLREMQFCTYDGVFIWKIADFSRRRQDAVGGRAPAMFSPAFYSSK
YGYKMCLRLYLNGDGTGRGTHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIID
AFRPDVSSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVDLTGL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcactggcgacactgtaagtaaatggaaggctatggcgcatccatctttaccc
tcctctttggactccacgttgcctggaatatgtcgggatgtgctgtcggtgtccatggaa
tcaaaataccaatgtcagcagtgtaaagagatcctgcggaaaccgtaccaagcacagtgt
ggacatcgcttctgcgttttctgtttcaaacaactcaccagtacagggccgacaccctgt
gaagcctgccgtgccgagggtatttttgaggagtcaacttccatgcttgatataacagtg
gcatttcctgacaacgcagcacgaagagaaattgatagcttgcccgcaaaatgcccgaat
gaagggtgtagttggaatggactgctgaaagactatgagggtcagcatgaaggtcgctgt
gagtttgagcgtgttaaatgtgaagcatgtcaagcactcatcttgctcagcgagaaagac
cgtcataatgaacgtgaatgtgaggccagaacgctcaactgcaaatattgcaaagtcaca
ttcaacttcaaagaaattaaggcacatgatgaaatttgtcagaagtttcctatgcagtgt
aaagattgtggcaaaaagaaaattcccagagaaaagtttcaagagcacatcaagtcctgt
gcaaagtccaagtcagcatgtcagttcagtgagattggatgcagagcagtgttggacaat
ggcaagcagcaggaacatgagcagatgagcgtcatagagcacctgcgtctcatgttgggg
gttttgtccactgtgcggctgcgtcctgaaacaggcggagaatggcaggaagactctggg
ctgggattatatcgaggacccgaagacgcacccctggtgggagctcacgccgcagcgcat
aatgtgggacgaggaggcagcccgagcgtgcagcacaaagtcacagcattggagaacata
gtatgcgttctgaatcgagaggtggagcgcgcggccctcacactggaggcgctgtcacgg
caacatcgaatagatcaggacaagatcgaaaacttgtcgactaaggttagacagctggag
cgtactttaactatgcgagatctgcagttagcagaatccgagcagtctctgcgggagatg
cagttctgcacttacgatggagttttcatatggaaaatagcagacttctctcgccgcaga
caagacgctgtggggggccgagcacctgctatgttctcaccagcattctactccagtaaa
tatggctataagatgtgtctgagactctatctgaatggtgatggcactggcagaggcact
catctctctctcttcttcgtggtcatgagaggcaaatatgacgccctgctgaagtggccc
ttcagccagaaggtgacattaatgcttttggaccagaacaacagagagcacatcatcgat
gctttcagacctgacgtgagttccacatccttccagaggcccattagtgagatgaacata
gccagcggctgccctctcttttgccccctcgccaagctagcaggcaaaagctcttacctg
agagatgataccatattcatcaaagccatagttgatctcaccggcttgtaa
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