Triplophysa rosa: 130553401
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Entry
130553401 CDS
T09216
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tros01009
]
130553401 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130553401 (trpc5a)
Protein phosphatases and associated proteins [BR:
tros01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130553401 (trpc5a)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130553401 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_3
Ank
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Nup88
Motif
Other DBs
NCBI-GeneID:
130553401
NCBI-ProteinID:
XP_057188328
LinkDB
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Position
LG4:complement(6072406..6132506)
Genome browser
AA seq
1044 aa
AA seq
DB search
MNPMSHLYYKKSSYSPYRDRIPLQIVRAEVELSTEERSFLSAVEKGDYAGVQHALREAEV
YYNIDVNCVDPLGRSGLLIAIENENLEVMELLLDYGVNTGDALLYAIRKEVVGAVELLLS
HRKPSGEKQVPSLMMDAQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDQSEELDPREGRDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVMCIIIGLLFPVFSIIYLLAPKSTLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHIQGPPPTLVEWMILPWVLGFIWA
EIKEMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETKAADEPNHCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVRARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIIPSPKSCWYLCQWVHKRLCGSEAAPPEEPHKHENLKEFTEKHADRLIQNQHYQE
VIRSLVKRYVASMIRSAKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRNYSSSS
EATFRDEVSDDGEVSSNNCHHSDGSSIGAKGVTFKTNTPSDPSYGVSALFSSISGIEVAT
ATAASPAYREGKPKINGLRKNPSPSSSLSSVAPARPALSRTWRRLSRFSSSKKNSFRRLG
LLFSRMGSHLPQPAGVTAATYTISDGLLHPPGAWQDLGFTRGDGPVTRSETNLNRVDVAT
LNEGDSVAMATNGQRDNVRDVLLTLGPLSPPTSLHCASNFSASSSRLLDSSEDVFQGLVG
PCEGQMRDTSHWVTEQDDSVTTQL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgtcacacctgtactacaaaaagagcagctactctccgtaccgcgaccgg
atcccactccaaatagtccgggcagaggtcgaactttctacagaggagcgttccttcctt
tccgccgtggagaagggcgactatgcgggtgtccagcacgctctgcgagaggctgaagtg
tattacaatatcgacgtaaactgcgtggatccgttaggtcgcagtgggctgctaatcgcc
atcgagaatgaaaacttagaggtgatggagcttctcctggattacggggtgaacaccgga
gatgccttgctctacgccatccgcaaagaagtggtgggggctgtggagttactgctgtcc
cacagaaaacccagcggcgagaaacaggttccatccttaatgatggacgcccagttctca
gaattcacgcccgacatcactcccattatgctggctgcccacacgaacaactacgagatc
atcaaactcctggtccagcgcaaggtcaccatccccaggccgcaccagatccgctgcgac
tgcgtggagtgcgtgtccagctccgaagtggacagcttacgtcactctcgatctcgcctc
aacatctacaaagcccttgccagcccctctctcattgccctctccagcgaagatcccatt
ttgactgccttcaggctgggctgggaactcaaggagctcagtaaggtcgagaacgagttt
cgacaggagtacgaggaactttctcaacagtgtaagctctttgctaaagacctgctggac
caggcacgtagctcccgtgagctggagaccatactcaatcaccgtgatgaccagagcgag
gagttggacccgcgagagggcagagatctggccaaactcaagctggccattaaataccac
caaaaagagtttgtggctcagccgaactgtcagcagctcttggccacgttgtggtacgac
ggtttcccaggatggcgtcgccggcactgggcggtgaagttggtcatgtgtattattatc
ggcctgctctttcctgtcttctccatcatctacctgctggctcctaaaagcactttaggg
ctcttcatcaaaaaacccttcatcaaatttatctgccacacggcctcctacctcaccttc
ctcttcctcctcctgctggcctcgcagcacatagcacgcaccaacctacacatacagggc
cctccgcccactcttgtcgagtggatgatactaccttgggtgctgggtttcatctgggct
gagatcaaagagatgtgggatggaggttttaacgaatatgtccatgactggtggaaccta
atggacttcgccatgaattctctctatttggccacaatatccctcaagatcgtcgcctat
gtaaagtataacagttctcgtcctcgagaggagtgggagatgtggcacccgacgctaatt
gccgaagctttgtttgctatcgctaacatcttcagctcactgcggctcatctccctcttc
acggccaactcacacctggggccgctgcagatctctctgggccggatgctgctggacatc
ctcaagttcctcttcatctactgtctggtgctgctggccttcgctaacggactcaaccag
ctttacttttactacgagaccaaggccgcagacgaacccaaccactgcaagggaatccgc
tgtgagaaacagaacaatgccttctctacgttatttgagaccctgcagtccctgttttgg
tcgatattcggcctactgaatctgtacgtgaccaacgtgagggctcggcacgagttcact
gaatttgtgggcgccaccatgttcggcacgtacaacgtcatctccctggtggttttgctt
aacatgctcattgctatgatgaacaactcatatcagctcatcgctgaccacgctgacatt
gagtggaagtttgctcggaccaagctgtggatgagttacttcgacgagggagggacactc
cctcctcccttcaacatcatcccaagtcccaagtcatgctggtacctgtgtcaatgggtg
cacaagcgtctctgcgggtcagaggctgctccgcctgaagaaccccacaaacacgagaac
ctgaaggaattcacggaaaagcacgctgacagactgatccaaaatcagcactatcaggag
gtcattcgaagtctggtgaagaggtacgtggcatccatgattcgcagcgctaagacgaac
gaaggcctgacggaagagaactttaaggagttaaaacaggacatttccagcttccgctac
gaagttttggacctcctcggcaaccggaagccgccccggaggaactattcctccagtagc
gaggccacgttcagagacgaggtcagcgatgacggcgaggtgtcgagcaacaactgtcac
cacagcgacggcagcagcatcggagccaagggcgtgactttcaaaaccaacacgccttcg
gatccctcctatggcgtctccgccctcttcagctctatctccggaatagaggtcgccacg
gcgacggcagcatcaccggcgtacagggagggtaaaccaaagatcaacggattaaggaag
aacccctcgccctcctcttccctttcctccgtggctccggcaagacctgcactttcacgg
acgtggaggcgcctttcacgcttctctagctccaagaagaactccttcagacggctcggc
ctgctcttctcacgcatgggcagtcaccttccccagcccgcaggcgttacggcagcaacc
tacactatctcagatggattgcttcacccacccggggcttggcaggacttaggcttcacc
aggggtgatggtcctgtcacccgcagtgagaccaacctcaatcgggtggatgtggccact
ttaaatgagggcgacagtgttgccatggcaactaatggacagagagataacgtgagggat
gttttgctgacattaggacctctttccccacccacctccctccactgtgcttccaatttt
tcagcttccagttcccgcctcctggactccagcgaggacgtgttccagggattggtcggg
ccttgtgaaggacagatgcgagacacctcccactgggttactgaacaggatgattcggtg
accacgcagctatag
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