Triplophysa rosa: 130553641
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Entry
130553641 CDS
T09216
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
tros
Triplophysa rosa
Pathway
tros04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130553641 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130553641 (smcr8b)
Membrane trafficking [BR:
tros04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
130553641 (smcr8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
CC2D1A-B_DM14
Motif
Other DBs
NCBI-GeneID:
130553641
NCBI-ProteinID:
XP_057188701
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All DBs
Position
LG4:5145952..5150152
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AA seq
983 aa
AA seq
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MIGSPDLVAFTKEPDFEDTPIDPFALPEELSVPSYTGDGTPWSKMSNVKFKKDFILLAEF
SEQVGPQPLLTVPHETKACGTFDLNHFSLRIMSVDYQTSLTGSGINTPKLNFMEDSKVVL
GDSKEGVFSYIHHFTLYDLEARGFVRPFCLAYVSSDENKIIQQFQQLSSEFSKVSECLKT
GNRKSFANELETKLRDLEYTRVVLLRETEGENVMNSSVKYTNEREWTLNDIPTLERETEN
EKLKDKSLLHKEEVNVQEEAGHARQKLETRNCTLQLESENASNNRSAVLINRTEEQKDKL
KKEYCSKPVDKITEELMNVEKSIQEHNGLLKQVTSYPTRKLRDSDFSPYEPDDLPHSLEL
DLDDSRPHGQFSGPVPDCSVIPYMNTPLHSPKLIDTTSCRRFDRRLKTLEELCDEYFHQQ
ALQQLHSIEKTFRGDASHIYTNQLCQNLLRNLKSTNVLFEDTYDSEDAAGLQPGKAASHS
SIYQASFLPASTILSEPVSLESYASCVEMVPIKLELGGSSPSVTLSRTLSGPSDENPPLS
SEVHAEIEDNGEVSTPDCGHSQDAAVMKTSISSGDSIEVLGTEKSFRSQCSSVPSNTAMP
KPAPTCTTAAPEGLKQARAPTGRTCSEDSIEVLSTTDSFLPEDLRASYPCAIDEESLEQD
TDEKDLMSQNQKDKQVECVVDESHGCPSITLSPPDPAVTFPSDDDCHASCTNLSLLEEPC
PTVRDDLSDCFSFRSTTASTASDTFSACIHGDKREGGSRQRCGRVGRAALKFLRQFPFTV
HAVFSLLSGRTLVVLGSEEGTVRRLVAALSVYTPHSSSYRESVQPWISTQLQLTDLLNWK
LIGFNRMCSPTPGFPHCLGHYSRYISVLDADQKTLRCPTYSGTLINHLVDPRSHIIRGST
YFLFAQSVLGKLVARAFFLTFSHTLKMGTNSRKSTQTVRCLEHLHRDDKKILHYLSELIK
LHFTDVPPNVLRFSYTANSVFKL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgattggttctccagatttggtggccttcactaaagagcccgatttcgaagatacaccc
atcgatccatttgcgcttccagaggaactgtctgtaccctcttatactggtgacggcaca
ccgtggtctaagatgtctaatgtgaaatttaaaaaggattttatccttttagctgagttt
tccgaacaagttgggccccagcctttgcttacagttcctcatgaaaccaaagcttgtggg
acatttgatttgaaccacttctccctccgaattatgtcagtggactatcagacctccctc
actggctcagggatcaacacccctaaactgaacttcatggaggactccaaagtagtttta
ggagattccaaagagggagtgttttcatacatacaccacttcacgctgtatgacctggag
gctcgagggtttgtgcggcctttctgccttgcctacgtgtcgtccgatgagaataaaatc
atacagcaatttcagcagctttcttcggagttctccaaggtttcggaatgtctgaaaacg
gggaacagaaagagctttgcaaatgaacttgaaaccaaactaagggatttagagtataca
agagttgttttacttcgagagactgagggagagaatgtaatgaactcatctgttaagtac
accaatgaaagggaatggacgttaaatgatataccaacattagagagagaaacagagaat
gagaaacttaaagacaaatcactgttacacaaagaagaagtgaatgttcaagaggaagct
ggacatgcaagacagaaactagagacacgaaattgtacattgcagcttgaaagtgaaaat
gcctcaaataacaggtctgctgtgcttatcaatagaacagaagaacagaaggacaagctg
aagaaagagtactgctcaaagccagtggataaaataacagaggaactgatgaatgtggag
aaatctattcaagaacataacggccttctgaaacaagtcacctcctacccaacaagaaag
ctcagagactctgacttctctccttatgaaccggacgaccttcctcattctctggagctt
gacctggatgattctagaccgcatggtcaattctccgggccagtcccagattgcagtgtc
attccttacatgaacacacccttgcattctccaaagctgattgacaccacttcatgtagg
agatttgacaggcgcctgaaaactcttgaggagttgtgcgacgagtacttccaccaacag
gccttacagcaattgcactccattgaaaagacattcagaggagacgccagtcatatctac
acaaaccaactgtgccaaaatctgctccgcaatctcaaatccacaaatgttttgtttgag
gatacttacgactcagaagatgctgcaggattacagccaggaaaagctgccagtcattca
tcaatctatcaagcgtcttttcttccagcatccacgattctgagtgaacctgtgagtctt
gaatcatatgcctcttgtgttgaaatggtgcctataaaactagagttgggtgggagtagc
ccatctgtaaccttatcaaggaccttaagtggtccttctgatgagaacccacccctttca
tctgaagtacatgcagaaattgaagacaatggggaagtttcgacaccagattgcggtcat
tcccaagatgcagctgtgatgaagaccagcattagcagtggagacagtattgaggtcttg
ggaacagaaaagtccttcaggtcacagtgttcaagtgtacctagcaatacagcaatgcca
aaacctgcacccacctgtaccacagcagcaccagagggtctaaagcaagcgagggcaccc
accgggcggacttgcagtgaggacagcattgaagtgcttagcacgacagactcattcctt
cctgaagacctgcgggcttcgtacccatgcgctatcgatgaggaaagcctggagcaagac
actgatgagaaagacttgatgtctcaaaaccaaaaggacaaacaagttgagtgtgttgtg
gatgagtcacatggttgtccatcaataactctatccccaccagaccctgctgtaacgttc
ccttctgatgatgactgtcatgcatcatgtaccaatctctccttgttggaggaaccctgc
ccgacagtacgggatgatttatccgactgctttagttttcgcagcaccacggcctcaaca
gcttctgacactttctccgcttgtattcatggggataaaagagaaggtgggagcagacag
aggtgtgggcgagtaggacgggcagcattgaaattcctgcgacagtttccgtttacagta
cacgctgtgtttagccttctgagcggacgtacgctggtagtgctagggagtgaggagggt
acagtaaggcgactggttgcggcactgtccgtctacacaccacattcaagtagttacaga
gaaagtgttcaaccttggatttcaacacagctgcagcttaccgacctgcttaactggaaa
cttatcggattcaacaggatgtgctctcccactccaggttttcctcactgtctgggccat
tatagccgatacatcagtgttctggacgcagatcaaaagacactgcgatgtccgacatat
agcggtactcttatcaaccatctggtggatccaaggagccacattatacgagggagcacc
tacttcttgtttgctcagagtgtgctaggcaagcttgttgccagagccttcttcttaacg
ttctcgcatactctaaaaatgggcacaaactctcgtaagagtacacagacggtgcgttgt
cttgaacaccttcacagagatgacaagaaaatcctgcactatttatctgagctcatcaaa
ctgcatttcacagacgttccaccaaatgtccttcgattcagctacaccgccaactcagta
ttcaaactctaa
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