Triplophysa rosa: 130560050
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Entry
130560050 CDS
T09216
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130560050
Membrane trafficking [BR:
tros04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130560050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
VPS53_C
Motif
Other DBs
NCBI-GeneID:
130560050
NCBI-ProteinID:
XP_057199497
LinkDB
All DBs
Position
LG10:complement(2374846..2395952)
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AA seq
1772 aa
AA seq
DB search
MKRNKHRASKDDGKAQDEPAILETEDMRMPDPDTISLASVTAVTTNVSNKRSKPDIKIEP
SAGRPMDFQVSVTVIEARQLVGLNMDPVVCVEIGDDKKYTSMKESTNCPYYNEYFVFDFS
VPPDVMFDKILKISVIHSKNLLRSGTLVGSFKLDVGTVYSQPEHQFFHKWATLCDPEDIT
AGCKGYVKCDVSVVAKGDTIKTPHKANETEEDDIEGNLLLPEDVPAERQWAKFYLKIYRA
EGLPKMNTSIMANVKKAFIGENKDLVDPYVQVQFAGQKGKTSIQKSSYEPIWNEHIVFTE
QFPPLCRRMKVQIRDSDKVNDVAIGTHFIDLRKIANDGDKGFLPTLGPAWVNMYGSTRSY
TLMDEYQDLNEGLGEGVSFRARLLVSLAVEILDTSSPDVMSSTEVQVEGIPNISDNATGK
IEEFFLFGCFLEATMIDRKIGDKPINFEVTIGNYGSEVDTPTKPRSKKKKGDGDDEESEL
IHGSSDEEMDTGGDMTSVSTTPPMKPVITERNYFHLPYFERKPCICIKSWWQDQRRRLYN
SNIMDNIADKLEDGLNDVQEIIKTEKAYPERRLRGVLEELSQGCSTFVTLVNNDQNQTGK
TKLDRERLKSCMHELENMGQQAKSMRSQVKKSNVRDKIKLAHHFLQKLRFLSDEPQHSIP
DIYIWMISNNKRIAYARVPSKDILHSPLEEEKGKDCGKVQTIFFKLPGKKSFGPAGWTVQ
AKTELYLWLGLNRQRKDYLNGLPNGFEENKAVKGVQSSPPISLQYTMKQIFQLRVHMYQA
RSLFAADSTGLSDPFARVFFSTHSQVTEILNETLCPTWDQLMVFDNVELYGEAGELRDDP
PIIVIEIYDQDTVGKADFMGRTFAKPLTKMSDEHYGPPRFPPQLEYYQIYRGNCTAGEML
AAFELLQIGPGGKADLPPIDGPTDIDRGPILPVPIGIRPVLSRYRIEVLFWGLRDLKRVN
LAQVDRPRVDIECAGKGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDC
RAFGRYTLVGSHAVTSLRKFIYRPTEKSVNNWSAMDEVVIHTEPEAAVKKIETVVKLDSA
SDAVVKVDMEEEKGGKGKKKRKKGEEPDEEELDESMLDWWSKYFASIETLKDIIKAQEAE
AEEKDDFESGEGRKKRGKGRNKPAPGETGPEKKRQKIEELKVYNRELEIEYNNFEDWLHT
FNLFRGKCSDDANVEQNAADEDRLIGKFKGSLCIYKVPLSDEVSREMSFDSNMGMFQNIP
HNDPINVMVRVYVLRATDLHPADINGKADPYVAIKLGKSEIKDKESYISKQLNPVFGKSF
DIEATLPMDSTLTVSIYDWDLVGTDDLIGETKIDLENRYYSKHRATCGLTSSYAIHGYNV
WRDPLKPTQILAKFCKDSKMDQPQYGPGGRVKVANRVYTGPTEIEDENGLKKQTDEHLAL
AVLNRWDDMPRIGCKLVPEHVETRPLLNPDKPGIEQGRIEMWVDMFPKDMPAPGPALDIS
PRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTG
EGNFNWRFIYPFDYLQAEEKIVISKKESMFSWDETEYKIPARLNLQVWDADHFSADDFLG
AIELDLNRFPRGAKTAKQCSIDMVINEQDMPMVNIFKQKRIKGWWPFVARDENDELEITG
KVEAELHLMTSDEAEKSPVGEGRNEPEPLEKPNRPDTTFLWFLSPLKAIRYLICKQYKWL
VIKIVLALLLLAMLGLFLYSMPGYMVKKLLGA
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaacaagcaccgtgcatcaaaggatgacggaaaagctcaagatgaaccagcc
atactggagacagaagacatgagaatgccagaccctgacacgatctcattagcctcagta
acagcagtcaccaccaatgtctccaataaaagatcaaagccggacatcaagatcgaacct
agcgctggaagaccaatggatttccaagttagtgttactgtcatagaggcccgacagctg
gtgggtctgaatatggatccagtggtgtgtgtagaaatcggagatgacaagaagtacact
tcaatgaaggagtcgactaactgcccttactacaatgagtactttgttttcgacttcagc
gttcctcccgacgtcatgtttgacaagatcctgaaaatatcagtcatccactctaaaaat
cttttgcgaagtggaacgcttgtcggaagcttcaagcttgacgtgggcacagtatattca
caacctgagcatcagtttttccacaaatgggccactttatgtgaccctgaagacatcacc
gctggatgcaaaggctatgtcaagtgtgacgtctcggttgttgcaaaaggcgatactatt
aaaactccacataaagcaaatgagaccgaagaggacgacatagaggggaatcttctgctg
ccagaagacgttccagctgagcgtcagtgggcgaaattctacttgaagatctaccgagcc
gaaggattgcccaaaatgaacaccagcatcatggctaatgtcaagaaagcgttcattgga
gagaacaaggacctggtggatccgtacgtccaggttcagttcgcaggacagaagggcaag
acatctatccagaagagcagttatgagcccatctggaacgagcatattgtcttcaccgag
cagtttccacctctgtgtcgtagaatgaaggtgcagatccgcgactcggataaagtcaat
gatgtggccataggaacgcacttcattgacttgagaaagatcgcgaatgatggagacaaa
ggcttccttccaaccctggggccggcttgggtcaacatgtacggctcgacgcgtagttac
accctcatggacgagtaccaggacttgaacgaaggtttaggggagggtgtgtcgttccgt
gcccggctgctcgtcagtctggctgtggagatactggacacctcttctcccgatgtcatg
agctccactgaggtgcaggtggaggggatacccaacatctcagataatgccacaggaaag
attgaggaattctttctcttcggatgtttcctcgaggccactatgattgacagaaagatt
ggagacaaacccatcaactttgaggttacaataggaaactatggcagtgaggttgatact
ccaaccaaaccacgatcaaagaagaagaaaggagatggagatgatgaagagtctgagctc
attcacggctccagtgatgaagagatggatactggtggagacatgacttcagtttccacc
acacctccaatgaagcccgtcatcaccgaaagaaattatttccacctgccctatttcgag
aggaagccctgtatctgtatcaagagctggtggcaggaccagagacgacggctttataat
tctaacatcatggacaatatagcagataaactggaagatggattaaatgatgttcaggag
atcattaaaacagagaaggcgtatcctgaacgcagactcagaggagtcctagaagagctc
agccaaggctgcagtaccttcgtaactttggtgaacaatgaccagaaccagactggaaag
acaaagctggaccgggagagactgaagtcttgcatgcatgagctggagaacatgggccag
caggcaaagagcatgagatcacaggtgaagaagagtaacgtgagagacaaaatcaaactg
gcacaccactttctacagaagctcagattcctgtctgacgagcctcaacacagcattcca
gatatttacatatggatgataagcaacaacaagcgcatcgcgtacgctcgcgttccctct
aaagacatccttcactctccgctggaagaagagaaggggaaagactgtgggaaggtccag
accatctttttcaagctccctggtaagaagagttttgggcctgcggggtggactgttcag
gccaaaaccgagctgtatttgtggctgggcctgaaccgacagcgtaaggactacctgaac
ggattacccaacgggtttgaggagaacaaagcagtcaaaggagtgcagtcgtccccaccc
atcagtctgcagtacaccatgaaacagatcttccagctgagggtccacatgtatcaggct
cggagtctgttcgctgcagacagcacgggactgtcggaccctttcgctcgggttttcttt
tccactcacagtcaagtaacagagatcctgaatgagaccctgtgtcccacgtgggatcag
ctgatggtgtttgataatgtggagctgtacggcgaggcaggtgaactgagagacgatccg
cctataatcgtcatcgagatctatgatcaggacacagtcggtaaagctgatttcatgggc
cgcacgtttgctaaacctttaaccaagatgtcagatgagcattatggacctccacgattc
cctcctcagttagagtattaccagatctaccgcggtaactgcaccgctggagagatgctc
gcagcctttgaactgctacagattggcccgggtgggaaggctgatctgcctcccatagat
ggacctacagatattgaccgcggtccaattctgcctgttcctatcggaatcagacccgtc
ctgagtagatacagaattgaggtgttgttctggggtctgagggacctgaagcgagtgaat
ctggcacaagtggatcgtcctcgtgtggacatcgagtgtgcggggaaaggcgttcagtca
gctctgattcaaaactacaagaagaatcctaatttcagcactctggtgaagtggtttgaa
gtggatctgcctgaaaacgagcttcttcatcctcctctgaacattcgggtggtggactgc
agggcgttcggacgctacacgctggtgggctctcacgccgtcacgtctctgcgcaagttc
atttacagaccgacagagaagagtgtcaataactggtctgctatggacgaggtcgttatc
cacacagaaccagaagcagctgtcaagaagatcgagacagtggtcaaactggactcggcg
tctgacgctgtggtgaaggttgatatggaggaagagaaaggtggtaaaggcaaaaagaag
cgtaagaagggggaggagccagatgaggaggagctagatgagagcatgttggactggtgg
tccaaatacttcgcttctattgagacactaaaagatataattaaagcacaagaagccgaa
gctgaagagaaggatgatttcgagtctggagaaggcaggaagaagcgagggaagggaagg
aacaagccagcacctggagagaccggaccagagaagaagaggcagaagattgaggagctt
aaggtgtataacagagaacttgagattgaatacaacaattttgaagactggcttcacacc
tttaacctgttcagagggaaatgctcagacgacgctaatgtggagcagaacgcagccgat
gaggacagactcattggcaaatttaagggctctttgtgtatctataaagttcctctgtca
gatgaggtgtccagagaaatgagctttgattccaacatgggcatgttccagaacattcca
cacaacgacccaataaacgtcatggtccgagtctatgtcctcagggcaacagatctccat
cccgcagacatcaatgggaaagcagatccttatgttgcaattaagctcggaaaatcagag
ataaaggacaaagagagttacatctctaaacagctcaaccctgtgtttggaaagtctttt
gatattgaagcaacacttccgatggactccaccctcaccgtgtccatctatgactgggat
ttggtgggaaccgatgatctgattggagagacgaagattgatttggaaaaccgttactac
agcaaacaccgggcaacatgtggccttacctccagctatgcaattcatggctataacgtg
tggagagaccccctgaaaccgacacaaatccttgccaaattctgcaaagacagcaaaatg
gatcagccccagtatggcccgggaggaagagtgaaggtggccaacagagtttacacggga
cccaccgaaatcgaggatgaaaacggactgaagaaacagacggatgaacatctggctctt
gctgtgctcaaccgctgggatgatatgccacggattggctgcaaactggttcccgagcac
gtggagacgagacctctcctgaatcctgataaaccaggcatcgagcagggacgaattgag
atgtgggtggacatgtttccaaaggatatgcctgctcctggacctgctcttgatatttct
ccacgcaaaccaaagaaatttgagctgcgggtgatcgtgtggaacacagatgaggtcgtt
ctggaggacgatgacatcttcacgggagaaaagtctagtgacatattcgttcgaggctgg
ctgaagggtcaacaggaggataaacaggacactgacgtccactatcattcactgaccggt
gaaggaaacttcaactggcgcttcatttatcccttcgactatctgcaggcagaggagaag
attgtcatctcaaagaaagagtccatgttttcctgggatgagaccgagtacaagattcct
gcccgactgaatctacaagtctgggatgccgatcatttctccgctgatgattttctgggt
gcaattgaactggatctcaatcgattccctcgcggggccaagacggcgaagcagtgctcc
attgacatggtcatcaatgaacaggacatgcccatggtcaacatcttcaaacagaagaga
attaaaggatggtggccgttcgtggccagagatgaaaacgatgagctggaaattactggg
aaagtagaagcggagctccatctgatgacgagtgacgaggctgagaagagtcctgtgggt
gaaggacgcaatgaacccgaaccactcgagaaaccaaaccgtcctgacacgacattcctg
tggttccttagcccgctaaaggccatccgctatctcatctgcaaacaatacaagtggctg
gtcatcaaaattgtgctggctctgttgctattagccatgctgggtctgtttttgtacagt
atgcccggatacatggtgaaaaaacttctaggggcttga
DBGET
integrated database retrieval system
