Triplophysa rosa: 130560364
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Entry
130560364 CDS
T09216
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
tros
Triplophysa rosa
Pathway
tros04620
Toll-like receptor signaling pathway
tros04621
NOD-like receptor signaling pathway
tros04622
RIG-I-like receptor signaling pathway
tros05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130560364 (traf3)
04621 NOD-like receptor signaling pathway
130560364 (traf3)
04622 RIG-I-like receptor signaling pathway
130560364 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130560364 (traf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Crescentin
zf-C3HC4
ATG16
zf-C3HC4_2
zf-C3HC4_4
Sina_ZnF
CENP-K
zf-RING_UBOX
EzrA
BLOC1_2
DUF7491
MscS_porin
Exonuc_VII_L
zf-TRAF_2
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
130560364
NCBI-ProteinID:
XP_057200067
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Position
LG10:14704077..14718902
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AA seq
599 aa
AA seq
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MSGSIGDILQRNGVGSSDDVVEQLIHVMSAGRNVEQQIALQQRPPSLGMPSMAPRSRPEP
GFFPLQGGFRDHFVTTPEPKYCCESCRLVLCKPRQTECGHRFCETCITELLSKPNPVCPA
DLESLFEDKIFRDVCCNREIMALKVCCRSEKNGCKEQMSLQRVMDHLEVCPYFEVPCPLG
KCKEKMMRKDMSEHLSRKCKHREITCEFCNHKMALTELQKHKETVCPAFPVACPNHCSFP
SILRSELSSHQNDCPKAQVTCSFIRYGCSYKALNQEMREHESSFASEHLRMMAVRNTTLE
AKVEDIKSELMERYKVLPSLSSRLTEVETQYEEMREKNRQLEQKISSIQMLMSTHSEKLL
EVEIELRELRPLRALKEEVEALRGSVESMRTMVSSLDSGRVGSSSGPALGSFDQRLTRHD
DTLSVHDIRLAEMDLKLQVLETASFNGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGY
FGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDPLLPWPFKQKVTLMLMDQGPARKHLG
DAFKPDPNSSSFRRPTGEMNIASGCPLFVAQTVLENGTYIKEDTIYIKVTVDTSDLPDP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctccattggtgatattcttcagagaaacggggttggatcatcggacgacgtc
gttgaacaattgattcatgtcatgtccgcagggcgtaatgtggaacagcagatcgcactg
cagcagcgtcctccatctcttggcatgccctccatggccccgcggtccaggcccgagcca
ggcttctttccccttcaaggcggctttagggaccactttgtcacaacgccagagccaaag
tactgctgcgagtcctgcaggctagtgctgtgcaagcctcggcaaactgaatgcggacat
cgcttctgcgagacctgcattacagagctgctcagtaagcctaacccagtgtgtccagct
gatcttgaatcactctttgaagataagatattccgggatgtttgctgcaatagggaaatt
atggctctaaaggtctgctgccgaagtgagaagaatgggtgtaaagaacagatgagttta
cagcgggtcatggatcacttggaggtttgtccatacttcgaggtgccatgccccttggga
aaatgcaaggagaagatgatgaggaaagacatgtccgagcacctcagccgtaaatgcaaa
caccgagagatcacctgtgaattctgcaatcacaagatggccctcactgagttacagaaa
cacaaagaaaccgtttgtccagcttttcctgtagcatgtcctaaccactgctcctttcca
tccattttgagaagcgagctgtccagccatcagaacgactgcccaaaggctcaagtgacc
tgctcttttattcgctatggatgctcttacaaggcgctgaatcaggagatgagagaacat
gagtccagttttgcgtctgagcacctgagaatgatggcggtcagaaacaccacactggaa
gccaaggtagaggacattaagagcgagctgatggagcgctataaagttctgcccagtctc
agcagtcgcctgacggaggtagaaacacagtatgaggagatgagagagaagaacagacag
ctggaacagaagatatctagcattcagatgttgatgagcactcactcagagaaactgctt
gaggttgaaatagagctgagagagcttcgtccactgcgagctttaaaggaggaggtggag
gctttgagagggtcggtggaaagcatgcgtaccatggtttcttctctggactcgggtcgg
gttggatccagttctggtccagcactgggctctttcgatcagcgactgacacgccacgac
gacacgttaagcgttcatgacatccgcctggcagagatggacctgaagctgcaggttcta
gagacggccagcttcaacggtacactcatctggaagatccgtgactacaagaggcggaaa
caggaagccgttgcctccaaaactctctcgctctacagccagcccttttatacaggatac
tttgggtataagatgtgtgcccgtgtctatctgaacggggacggaatgggtaaaggcacg
catctctcccttttctttgtggtcatgcgcggggaatacgatcccttgctgccgtggccg
ttcaaacagaaagtgacgttgatgctgatggaccaggggccggcgagaaaacacttaggt
gacgccttcaagccggaccccaacagcagtagctttcgacggcccaccggcgaaatgaac
attgcctcgggctgtccgctcttcgtggctcagaccgtcttggagaacggaacttatatc
aaagaagacaccatctacatcaaggtcactgtcgacacctccgacctgcccgacccctga
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