Triplophysa rosa: 130561567 Help Entry 130561567         CDS       T09216                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism tros  Triplophysa rosa Pathway tros04010   MAPK signaling pathway tros04120   Ubiquitin mediated proteolysis tros04140   Autophagy - animal tros04144   Endocytosis tros04620   Toll-like receptor signaling pathway tros04621   NOD-like receptor signaling pathway tros04622   RIG-I-like receptor signaling pathway tros05132   Salmonella infection tros05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:tros00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     130561567 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     130561567 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     130561567 (traf6)    04140 Autophagy - animal     130561567 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     130561567 (traf6)    04621 NOD-like receptor signaling pathway     130561567 (traf6)    04622 RIG-I-like receptor signaling pathway     130561567 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     130561567 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     130561567 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tros04131]     130561567 (traf6)    04121 Ubiquitin system [BR:tros04121]     130561567 (traf6) Enzymes [BR:tros01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      130561567 (traf6) Membrane trafficking [BR:tros04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     130561567 (traf6) Ubiquitin system [BR:tros04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     130561567 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 TRAF3_RING zf-RING_5 RING_XB3-XBAT31 DM U-box zf-TRAF_2 zf-RING_11 TRAF6_Z2 Motif Other DBs NCBI-GeneID:  130561567 NCBI-ProteinID:  XP_057201983 LinkDB All DBs Position LG1:complement(28210630..28215921) Genome browser AA seq 538 aa AA seqDB search MACSDTEKSSLGGACCDSDYTSCAAAMEKERESYLSPTENPSTVSIPPDQQGYDVEFDPP LESKYECPICLMGLRSAVQTPCGHRFCQSCITKSIRDTGQRCPVDNEVLLEEQLFPDNFA KREILSLTVRCPNVGCGDKMELRQLEKHLSQCKFATEQCTQCHESVRIIYLDEHKTQHCL QRSMTCPDCAGSFVYADRQIHEQMCPFASTVCDYCGMEFIRDQLAVHCDTDCLKAPVACT FSTFGCREKMVRNDLAQHMQEFTQMHMRYMAEFLRTQTLNSSLNLPVISHFPSDERSASS RAPEPCQCSQELVILRETVLELEGRLVRQDQQIRELCIHNETQKTQLTEVRRKLSSLEEA TRELEAQQYQGVYVWRLENFSAHLHNQEAGQPVVLHSPPFYTGRPGYKLCLRLHLQTPNA PRCSNYISLFVHTMQGEFDSQLSWPLQGSIRLAVLDQVEGQHHVEVMETKPDLQAFQRPT VQRNPKGFGYVTFLHLQALQQRGFVKEDVLLVRCEVTPHSDASLRREGVQPRGPEPSP NT seq 1617 nt NT seq  +upstreamnt  +downstreamnt atggcttgcagtgacacagagaagtccagccttggtggtgcttgctgtgatagcgactac accagttgcgcagcagctatggagaaagagagagagtcatatcttagcccaactgagaac ccctcgaccgttagtatcccaccagaccaacaaggttatgatgtagagtttgaccctccg ctagaaagcaagtatgaatgtccgatctgtttgatgggtctcaggtcggcagtacagaca ccatgtggacatcgattctgccagtcgtgcatcacaaagtccatcagagacactgggcaa agatgtccagttgacaacgaggtgctgctagaagaacagcttttccctgataactttgcc aagcgagagatcctctcactgacagtccgctgccctaatgtagggtgcggtgataaaatg gagttgaggcaattggaaaaacatttatctcagtgtaagtttgccacagagcagtgcact cagtgtcacgagtctgttcgtataatctatctggatgagcataagacccagcactgctta cagcgcagcatgacctgtcctgactgtgccgggagctttgtgtatgctgacagacagatt cacgaacagatgtgtcctttcgctagtacagtgtgtgactattgtggaatggagtttatt cgagatcagttggcagtgcattgtgacacagactgtcttaaagctcctgtagcctgtacc ttcagcacttttggttgtcgtgaaaagatggtgagaaatgatctggcccagcacatgcag gaatttacacagatgcacatgcgttacatggccgagtttttgcgcacccagacactcaat agctcccttaatctgccggttatcagccacttcccgtcggatgaacgtagcgcctcctca cgggcgccagaaccttgccagtgtagccaggagttggtgatcttacgggagacagtcttg gagttagagggccgactggttcgtcaagaccaacagatccgagagctgtgcattcacaac gagacgcagaaaacccagctcacagaggtacgtcgtaagctcagctcattagaagaggcc acacgagagctggaggctcagcagtaccaaggcgtctacgtgtggcgcctggaaaacttc tctgcccatctgcacaaccaggaggctggtcagcctgtagtccttcatagcccacctttc tacacggggcggccaggttacaaactttgccttcggctgcacttgcaaacccccaacgct ccccgctgttccaactacatctcgctttttgtacacactatgcagggggagtttgacagc cagctctcctggcctttacagggctcgattcggctggcagtgctggaccaagtcgagggc cagcaccatgtggaagtaatggagactaagccagacctgcaggcctttcaacggcccact gtacagcgcaaccccaagggttttggctacgtcacttttcttcatctacaggctttgcag cagcgtggctttgtgaaagaggatgtgctgttggtgcgatgtgaggtcacaccacactcc gatgccagcctcaggcgtgagggggtccagcctcggggaccagaaccttcaccttga

DBGET integrated database retrieval system