Entry |
|
Symbol |
traf6
|
Name |
(RefSeq) TNF receptor-associated factor 6
|
KO |
|
Organism |
|
Pathway |
tros04620 | Toll-like receptor signaling pathway |
tros04621 | NOD-like receptor signaling pathway |
tros04622 | RIG-I-like receptor signaling pathway |
|
Brite |
KEGG Orthology (KO) [BR:tros00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130561567 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130561567 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130561567 (traf6)
04140 Autophagy - animal
130561567 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130561567 (traf6)
04621 NOD-like receptor signaling pathway
130561567 (traf6)
04622 RIG-I-like receptor signaling pathway
130561567 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130561567 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
130561567 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:tros04131]
130561567 (traf6)
04121 Ubiquitin system [BR:tros04121]
130561567 (traf6)
Enzymes [BR:tros01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130561567 (traf6)
Membrane trafficking [BR:tros04131]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130561567 (traf6)
Ubiquitin system [BR:tros04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130561567 (traf6)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
LG1:complement(28210630..28215921)
|
AA seq |
538 aa
MACSDTEKSSLGGACCDSDYTSCAAAMEKERESYLSPTENPSTVSIPPDQQGYDVEFDPP
LESKYECPICLMGLRSAVQTPCGHRFCQSCITKSIRDTGQRCPVDNEVLLEEQLFPDNFA
KREILSLTVRCPNVGCGDKMELRQLEKHLSQCKFATEQCTQCHESVRIIYLDEHKTQHCL
QRSMTCPDCAGSFVYADRQIHEQMCPFASTVCDYCGMEFIRDQLAVHCDTDCLKAPVACT
FSTFGCREKMVRNDLAQHMQEFTQMHMRYMAEFLRTQTLNSSLNLPVISHFPSDERSASS
RAPEPCQCSQELVILRETVLELEGRLVRQDQQIRELCIHNETQKTQLTEVRRKLSSLEEA
TRELEAQQYQGVYVWRLENFSAHLHNQEAGQPVVLHSPPFYTGRPGYKLCLRLHLQTPNA
PRCSNYISLFVHTMQGEFDSQLSWPLQGSIRLAVLDQVEGQHHVEVMETKPDLQAFQRPT
VQRNPKGFGYVTFLHLQALQQRGFVKEDVLLVRCEVTPHSDASLRREGVQPRGPEPSP |
NT seq |
1617 nt +upstreamnt +downstreamnt
atggcttgcagtgacacagagaagtccagccttggtggtgcttgctgtgatagcgactac
accagttgcgcagcagctatggagaaagagagagagtcatatcttagcccaactgagaac
ccctcgaccgttagtatcccaccagaccaacaaggttatgatgtagagtttgaccctccg
ctagaaagcaagtatgaatgtccgatctgtttgatgggtctcaggtcggcagtacagaca
ccatgtggacatcgattctgccagtcgtgcatcacaaagtccatcagagacactgggcaa
agatgtccagttgacaacgaggtgctgctagaagaacagcttttccctgataactttgcc
aagcgagagatcctctcactgacagtccgctgccctaatgtagggtgcggtgataaaatg
gagttgaggcaattggaaaaacatttatctcagtgtaagtttgccacagagcagtgcact
cagtgtcacgagtctgttcgtataatctatctggatgagcataagacccagcactgctta
cagcgcagcatgacctgtcctgactgtgccgggagctttgtgtatgctgacagacagatt
cacgaacagatgtgtcctttcgctagtacagtgtgtgactattgtggaatggagtttatt
cgagatcagttggcagtgcattgtgacacagactgtcttaaagctcctgtagcctgtacc
ttcagcacttttggttgtcgtgaaaagatggtgagaaatgatctggcccagcacatgcag
gaatttacacagatgcacatgcgttacatggccgagtttttgcgcacccagacactcaat
agctcccttaatctgccggttatcagccacttcccgtcggatgaacgtagcgcctcctca
cgggcgccagaaccttgccagtgtagccaggagttggtgatcttacgggagacagtcttg
gagttagagggccgactggttcgtcaagaccaacagatccgagagctgtgcattcacaac
gagacgcagaaaacccagctcacagaggtacgtcgtaagctcagctcattagaagaggcc
acacgagagctggaggctcagcagtaccaaggcgtctacgtgtggcgcctggaaaacttc
tctgcccatctgcacaaccaggaggctggtcagcctgtagtccttcatagcccacctttc
tacacggggcggccaggttacaaactttgccttcggctgcacttgcaaacccccaacgct
ccccgctgttccaactacatctcgctttttgtacacactatgcagggggagtttgacagc
cagctctcctggcctttacagggctcgattcggctggcagtgctggaccaagtcgagggc
cagcaccatgtggaagtaatggagactaagccagacctgcaggcctttcaacggcccact
gtacagcgcaaccccaagggttttggctacgtcacttttcttcatctacaggctttgcag
cagcgtggctttgtgaaagaggatgtgctgttggtgcgatgtgaggtcacaccacactcc
gatgccagcctcaggcgtgagggggtccagcctcggggaccagaaccttcaccttga |