Triplophysa rosa: 130561616
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Entry
130561616 CDS
T09216
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
tros
Triplophysa rosa
Pathway
tros04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130561616 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130561616 (ldlra)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130561616 (ldlra)
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
hEGF
Motif
Other DBs
NCBI-GeneID:
130561616
NCBI-ProteinID:
XP_057202041
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Position
LG11:complement(5047684..5062702)
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AA seq
854 aa
AA seq
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MDISLILLLTVTLFCPVRLDLVTCDAGQYQCGNGKCITMRWICDETDDCGDGTDELPAAC
LAKTCRPSEFSCGGRLNQCIPKSWRCDGKEDCENGADEDGCSPRQCLNGEFRCGSGQCVS
RAFVCDEEADCDDGSDEVSCPPITCGSSSFRCGNSQCVPRLWVCDGDTDCSDGADESPQK
CGSRPSTAPQNPCSSMEFQCGSGECIHGNWKCDGGEDCLDRSDEKNCSLAKCRLDEFQCG
DGSCIHGSLQCNQVYDCKDLSDELGCVNATYCEAPHKFKCRSGECIYMEKVCNRQRDCRD
WSDEPLRECESNECLYNNGGCSHICNDLKIGYECLCPAGFRLVEKRRCEDIDECENPDTC
SQICVNQVGSYKCECEDGYQIDPASKACKAIGTIAYLFFTNRHEVRKMTLDRSEYVRVIP
RLKNAVALDMNVASREIYWSDLSLKKIYRAPMDSADDSSQHSIVINSGLDAPEGLAIDWI
HGTIYWTDSIQGAISVATVDGDRRKTIFKENLAKPRAIVVDPIKNFMYWTDWGTPAKIER
GGLNGGDRTALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSISVQGGGRRTLIIDQDK
LAHPLGLTVFEEKVFWTDVSNNAILSANRVTGRDIRKVAEHLSSPEDIVLYHNLKQPSGI
NGCRINNGGCEFLCLAAPQINKFSPKYTCACPDHMMLARDMRKCVPAVITPATPLSPKMS
TTSRPQEPSQTSPKPASHFTTSVQPTPTKPSQTSTQHPSSTETDEHFGDVKAVTKTTPTP
MVLYIVLTLVLLCLAAFGGVLFWRKWRQKNTNSIHFDNPVYQKTTEDQVHLCRNRSSDGY
FHPQQQSVSLDDEI
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgttgatattgctgcttactgttactttgttttgtccggttcgattggat
ttggtgacctgtgatgcggggcagtatcagtgtggcaatggcaaatgcatcacgatgcga
tggatctgtgatgaaacggatgactgcggcgacggcacggatgagcttcccgctgcctgc
ttggccaagacgtgcagaccgtctgaattcagctgtggtgggcgactcaaccagtgcatc
cctaagagctggaggtgtgatggcaaagaagactgtgagaacggtgcggatgaggatggc
tgttcacctcggcagtgcttgaatggtgaattccgctgcggcagcggtcagtgtgtgtcg
agggcgttcgtgtgtgatgaggaggcagactgtgatgacggtagtgatgaagtctcctgt
ccgcccatcacctgtggctccagctccttcagatgtggcaactctcaatgcgtgcctcgg
ctgtgggtctgcgacggagacacagactgttccgacggcgcggacgaatcgccccagaaa
tgtggttcaagaccgtcaacggctccccaaaatccctgctcctctatggaattccaatgc
ggcagtggggaatgcatacacgggaactggaaatgtgatgggggagaagattgtttggat
cgatcggacgagaaaaactgctccttggccaaatgccgactggatgagttccaatgcggt
gatggctcttgtatccacggaagccttcaatgcaaccaagtgtatgactgcaaagattta
agtgatgagctgggctgcgttaacgcaacctattgcgaagcccctcacaagttcaaatgc
cgcagtggtgaatgtatttacatggaaaaggtttgcaacaggcagcgtgactgtagggac
tggtccgatgagccgctacgagagtgtgaatcgaacgagtgtctgtacaacaacggaggc
tgctctcacatctgtaatgacctgaagatcggttatgagtgcctgtgtcccgctggcttc
cgtctggtggaaaagagacggtgtgaagatattgatgagtgtgaaaacccagacacctgc
agtcaaatctgtgtcaatcaggtgggcagttataagtgcgagtgtgaggacggctaccag
atagatcctgccagcaaggcctgcaaagctatcggaaccatcgcatacctgtttttcact
aatcgtcacgaggtgaggaagatgactctggatcgcagcgagtacgtgcgcgttattcct
cgacttaagaacgctgtggcgctggatatgaatgttgcttcaagagagatctactggtcg
gatttatccctcaagaagatctacagagcaccaatggattctgcagatgacagctctcaa
cacagtattgtgatcaacagtggcttggatgcacccgaaggtctcgccatcgactggatc
cacgggacaatctattggacagatagcatccaaggcgccatctcagtggcgaccgtggat
ggagacagacgcaagacaatcttcaaagaaaacctggccaagccacgtgctatagtggtg
gaccctattaaaaacttcatgtactggactgattggggtacgccagccaagattgaaaga
ggtggtcttaatggaggcgaccgtaccgccctggttacagataacattgtctggccaaac
ggaatcacccttgacctgctgaaccagcgtctgtactgggtggactccaaactacacacg
ctctccagtatcagcgtgcaaggaggtggtcgacgtactctaatcatagaccaagacaaa
ctggctcaccctttgggtctcaccgtttttgaggagaaagtgttctggaccgatgtgagc
aacaatgcaattctgagtgctaatcgcgtgacgggaagagacattagaaaagtagcagaa
catctgtcgtctccagaagacatcgtgttgtaccataacctcaaacaacctagtggaata
aacgggtgcaggatcaacaatggaggctgtgagttcctctgcttggccgcccctcagatc
aacaaattttcacccaaatacacttgtgcctgtccggaccacatgatgctggccagagac
atgagaaaatgtgttccagctgtgattacgccagcaacccccctcagccctaaaatgagt
acaactagtcgtccacaagaaccatcgcagacgtcaccaaaacctgctagtcattttact
accagtgtgcaacctacccccaccaaaccctcccaaactagcactcaacatccatcatct
actgagacagatgaacactttggtgatgtaaaagctgtcacaaaaactactcccactccg
atggttctgtatattgtgttaactctcgttctcctctgtttggctgcgttcggtggtgtg
ttgttctggagaaagtggcgacagaaaaataccaacagcatccattttgacaaccccgtt
tatcaaaagaccactgaggaccaggtgcatttatgcaggaaccgtagttctgatggctac
tttcaccctcagcagcagtctgtgagccttgatgatgaaatctga
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