Triplophysa rosa: 130562289
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Entry
130562289 CDS
T09216
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
tros
Triplophysa rosa
Pathway
tros04010
MAPK signaling pathway
tros04020
Calcium signaling pathway
tros04510
Focal adhesion
tros04540
Gap junction
tros04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130562289 (pdgfab)
04020 Calcium signaling pathway
130562289 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130562289 (pdgfab)
04540 Gap junction
130562289 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130562289 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tros04052
]
130562289 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
tros00536
]
130562289 (pdgfab)
Cytokines and neuropeptides [BR:
tros04052
]
Cytokines
Growth factors (RTK binding)
130562289 (pdgfab)
Glycosaminoglycan binding proteins [BR:
tros00536
]
Heparan sulfate / Heparin
Growth factors/receptors
130562289 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
130562289
NCBI-ProteinID:
XP_057203194
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All DBs
Position
LG11:4073374..4095155
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AA seq
230 aa
AA seq
DB search
MEMRTLFCCFLLLTSHLLPAAAEKEFAIPQDFIDRLSHSEINSISDLQRLLEVNSPGAGN
EVIEEVKHRHHHKNHHHPASSDLKSLQLSHRRKRSIVEEAVPAMCKTRMVIYEIPRSQVD
PTAANFLIWPPCVEVKRCTGCCNTGSMRCHPSKKHHRTVKVAKVEFASRKKAKLKEVLIR
LEDHLECVCTSQHHVTEHVEADTGPRKVKNGKKRKHRKQAVAAQINKDIQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggagatgagaaccttattttgctgctttctgctcctcacgtcgcacctcctgccagca
gctgctgagaaggaattcgcaatcccacaagacttcatagacagactgtctcacagcgaa
atcaacagcatcagcgacctccagcggctactggaggtaaattccccaggtgctggaaat
gaagtgatcgaggaggtcaaacacagacaccatcacaagaaccatcaccatccggcttcc
tcagatctgaagagtcttcaactgtcccacagacgcaagaggagcatcgtagaggaggcg
gtgccagccatgtgcaagacacggatggtgatctacgagatccctcgcagtcaagtggat
cccacggctgcaaacttcctaatatggcctccgtgcgtggaggtgaagcgctgcacgggc
tgctgcaacaccggcagcatgcgctgtcacccgtccaaaaaacaccaccgtactgtcaag
gtggcaaaggtagagttcgcatcccgtaagaaagcgaaattgaaggaggtgctcatcagg
ttagaggatcatctggaatgcgtgtgcacatcacagcatcatgtgacggagcatgtggaa
gcagacacaggccctcgcaaagtaaaaaatggtaaaaaacggaaacaccgaaagcaagcg
gtggcagcacagatcaacaaggacattcaataa
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