Triplophysa rosa: 130567279
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Entry
130567279 CDS
T09216
Symbol
setdb1a
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-A
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
tros
Triplophysa rosa
Pathway
tros00310
Lysine degradation
tros01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130567279 (setdb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130567279 (setdb1a)
Enzymes [BR:
tros01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
130567279 (setdb1a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130567279 (setdb1a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
130567279 (setdb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
Tudor_5
Pre-SET
Tudor_4
MBD
DUF5604
Sigma54_AID
Motif
Other DBs
NCBI-GeneID:
130567279
NCBI-ProteinID:
XP_057211257
LinkDB
All DBs
Position
LG16:4662654..4672782
Genome browser
AA seq
1554 aa
AA seq
DB search
MSGEMDEENIMRMTKEELQRWIQAEVERNPQLMQRHEQLAQVEEWVKQREGEATYTRLMH
SNAYESVLECESVMKGLYGMLGLHYRDEDSEEEGGVREPRDVIQIIDDEEDGEKKSACDN
DNDIVVVDLGATKESLEPMLEKVTVAMERSSRLVQDLVEMVTKTSSGRTESSLDISIRPS
STLTPETSSSGCPTPAQCSSPMNQQPRTDSSFAIIKTESLWMATTPSLLSNSPKQPETIG
THNTEFTSRIKTEPPCETFSLQNNCKDHKTTYPSIASIKTEPELMEVTPDIFFRSSNSMN
AIKPEHDFMPVISKISSLSSDFEANRATVKTEPQSTPVSSEISPPETIVKHNSDSISTLK
TEPSFTKLKSEQPEMIPSHGPDRIKTKPQLTVMSSETSSLASNSEQPETIPDCNSAPDKT
SEMSSPSNSEQDNAISPDKSTSTDKAAAEQRQSSKSPEPSEKPKTRLRSSTASSNTPSSR
KETTRPSSHLDESDDAEEPYSPASSDDSYHPPSKSSKNDESDDTEDPDSAAHSDDSYQPP
SKSSKNKAKKNTSKVTSPSLRIPKPVAAPAAAPTAAAPPAPAPTAAAPPAPAAKPSDAKQ
ISTASSGIFPELPKEVELQVDTVVLAKVKSKTWYRGKVVETKTEENGHRYNIEFKNDKKC
LIPAHHVAFLKPPLLKDLFIGCRVVVSIKDEQDKMHFDAAVLVELPDRRNRMRFLVFYDY
GRATYLALPDLHLVCKQIKHVWKDIEDETCRSQVKEYLSVYPNPIAVVLRIGQDTKAKRN
GKFESCSVHQLDGSLVQICYKSDNHKEWVYKGSDKLEHIVNIKKRLAQQKQQESTGNNTS
ASSASSHVPRQSDSTSTTTITKPSPSPQNTNTSPASSTDVTRQTGGTPVSKSPSPSPQNN
TPAVSPTPATQQTDNAVAKAPSLSPQNTTAGVSSSHVTQQTDNAVAKAPSLSPQNTTAGV
SSSRVTQQTATTITRASSISLEKAKSAAFQPMVVLEKLAMPLFIPPAAIEAVSYPELRTE
KRPADDEVEEHVSEKNQAKFTNLFHRCCPACLNGTRPKQVDMYHGENPLQIPLLFNFRRM
TARRRLDGNVFFHIFYRSPCGRSLCDMEEVQNYLFETRCDFLFLEMFCMDPFVLVNRARP
PSTSTSQPYLYLPDISVGREVLPLPCINEVDQTPAPRVKYTRDRILAPGVSVNTSLDFMT
GCDCTDGCRDRTKCSCHRLTIEATSLCSDGPVDVTAGYTYKRLQTSLPTGVYECNPLCRC
DPRICSSRLVQHGLQLRLELFMTQHKGWGIRCKDDVAKGTFVCVFTGKIVTEDKVNEDDV
VSGNEYLANLDFIEGVEKLKEGYESEAYCSDTETESSKKTRTMKTGPLWKNILFQADSSS
GEDKDEPMELGNEREKMDACDTAFRERKLSHKPQKKSEGQKVSGPKRCFAIKSFERRVKA
LEKADPRNEKTRKGQPGNNTRKLFDGEEMCYIIDARQEGNLGRFINHSCSPNLFVQNVFV
DTHDLRFPWVAFFANKRIKAGTEMTWDYNYEVGSVEGKVLLCCCGSSRCTGRLL
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgaaatggatgaagagaacatcatgaggatgacgaaggaagagctccagcgc
tggatccaagcagaggtggagagaaaccctcagctgatgcagagacacgaacagctggca
caggtggaggaatgggtcaaacagagggagggcgaggccacctacacccgactgatgcac
agcaatgcctacgaatccgtccttgagtgcgagtcggtgatgaaaggtctttatgggatg
ctgggactgcactaccgagatgaggactcggaggaagaaggaggagtcagagaaccacgg
gatgtcattcagatcatagacgatgaggaagatggagagaaaaagagtgcctgtgataat
gataatgacattgttgtcgttgatctgggtgctaccaaagaatccttggagccgatgctt
gaaaaggtgactgtggccatggagagatcctccagactagtgcaggatttagtggagatg
gtgaccaaaacatcttccggaagaactgagtcatcattagacatctccattagaccttca
tcgaccttgactcccgagaccagctcttctggatgtccgacacctgctcaatgctcttcc
ccaatgaatcaacaaccaagaacggacagctcttttgcaataattaaaacggaatcttta
tggatggcaacgactccttccttgctttccaacagtccaaaacaacctgaaactatcggc
actcataatacagagttcacatcaaggatcaagactgaacctccatgtgaaacattttca
cttcagaacaactgtaaagatcataaaacgacttatccatccatagcatcaatcaaaact
gaacctgaactgatggaagtgactccagacattttttttcgttcgagcaattccatgaac
gcaattaaacctgaacatgatttcatgccggtgatttcaaaaatttcttcgctttcaagt
gactttgaagcaaacagagcaacagttaagactgaacctcaatctactccagtgtcttct
gaaatttcccctcctgaaacaattgtgaagcataattcagattccatatcaacgcttaag
actgaaccatcatttacaaaattaaaaagcgaacaacctgaaatgattcccagtcatggt
ccagatcgcatcaaaaccaaacctcaattgacagtaatgtcttctgaaacgtcttcacta
gcaagcaattcagaacaacccgaaactattccagattgtaattccgcaccagataaaact
tctgaaatgtcttcgccgagcaattccgagcaagacaacgctatttcccctgacaagtcg
acatccacagacaaggcggcagctgaacagaggcagtcttctaaatcccccgagccctca
gaaaaacccaaaaccaggctgagatcatcaactgcttcttccaacactcccagctcacgg
aaagaaacgactcggccatcttcacatcttgacgaatcagatgacgcagaggagccatac
agccctgcaagcagtgatgactcgtatcaccctccctcaaaatcatccaaaaatgatgaa
tctgatgacacagaagatcctgacagcgctgcacacagtgatgactcgtatcaacctccc
tcaaaatcatctaaaaataaagctaagaaaaacacaagcaaggtgaccagcccatcttta
agaatcccaaaacctgtcgctgctcccgccgctgctcccaccgccgcggctccacctgct
cccgctcccaccgccgcggctccacctgctcccgctgccaaaccctcagatgcaaaacaa
atttccacggcctcgtccggcatctttccagagttacctaaagaggtggaactacaggtc
gacacggttgtgttggcgaaggtgaaaagcaagacgtggtatcgaggaaaagtggtggaa
accaaaacagaagagaatggccacaggtataacatagagtttaagaatgataagaagtgt
ctgattccggctcatcacgtggcctttctgaagcctcccctgctgaaggatctatttatt
ggctgtcgggttgtggtcagcatcaaagatgagcaagacaagatgcatttcgatgccgcc
gtgctagttgaacttccagatcgcaggaatcgtatgaggtttttggtgttttatgactat
ggccgggcaacttatttggctctaccagacctgcatcttgtctgcaaacagatcaaacat
gtttggaaggacattgaggacgagacatgccggtcgcaggtgaaggaatatctcagtgtc
tatcccaaccccattgctgtcgtgcttcggattggtcaagacacaaaggcgaaacgtaat
ggcaagtttgagtcttgctcggttcaccagttggatggaagcctggtccagatctgctat
aagagtgacaaccacaaagagtgggtgtataaaggctcggacaagttggagcacattgtt
aatatcaagaagcgtctggctcaacagaaacagcaagagtccactggaaacaacacctca
gcgtcttctgcttcatcacatgtaccccgacaatctgatagcacatccaccaccaccatc
acaaaaccatctccgagccctcaaaacaccaacacgtcacctgcgtcttctacagatgta
acgcgacaaactggtggtacccccgtctccaaatcaccatctccgagccctcagaataac
acgcctgctgtgtctcccacaccggcgacacaacaaactgataacgcagtcgctaaagca
ccatctcttagccctcaaaacacaacggcgggtgtgtcttcctcacatgtgacacaacaa
actgataacgcagtcgctaaagcaccatctctgagccctcaaaacacaactgcgggtgtg
tcttcctcacgtgtgacacaacaaactgctaccacgatcaccagagcatcatctattagc
cttgaaaaagccaagtcagctgcattccagccaatggtggtgctggaaaagctggccatg
cccttgttcatcccaccagctgctatagaagcagtcagttacccggagttgagaactgaa
aagcgacctgcagatgatgaggtagaagagcatgtgtcggagaaaaaccaggcgaagttc
acgaacttgtttcatcgctgttgtccagcatgtctgaatgggacgagaccgaaacaagtt
gacatgtaccatggagaaaatccactccagattccattgctttttaactttcggcgaatg
actgctcgccgtcgtcttgatggaaatgtgttttttcacattttctatcggtcgccgtgt
gggcggagcctgtgcgacatggaggaagtgcaaaattacttgtttgaaacgcgttgcgac
tttctcttcctggaaatgttctgtatggacccattcgtccttgtgaatcgtgcccgaccc
ccttccacatcaaccagccaaccttacctgtacctgccggacatatcggtggggagggag
gttctcccgctgccctgcatcaatgaggtggaccaaacacctgctcctagagtcaaatac
accagagacagaattctggctccgggtgtctccgtcaacacgagcttagatttcatgact
ggatgtgactgtacggatggctgccgggacaggacaaagtgttcatgtcatcggttgacc
attgaggccacgtccttatgcagcgacggtcctgtagatgttacagctggatacacgtat
aagagattgcaaacctccttgccaacaggggtgtatgaatgtaaccctctctgccgctgc
gaccccagaatctgcagcagcaggctggttcaacacggcctgcagctgcggctggagctc
ttcatgactcaacacaaaggatggggcatccgctgcaaagacgacgtggccaaaggaacc
ttcgtatgcgtttttactggtaaaatcgtgactgaggataaagtgaatgaagatgacgtg
gtgtctggtaatgagtacctggccaatcttgacttcattgagggggtggagaaactgaag
gagggttacgaaagtgaggcgtactgctcggacacagagaccgaaagcagcaagaagacc
agaaccatgaaaacggggccattgtggaaaaatatcctctttcaagctgactctagcagt
ggggaagataaagatgaacctatggagctgggcaatgagcgagaaaagatggatgcctgc
gacacggcttttcgtgagagaaagctatcgcataaaccacagaaaaagtctgaaggacaa
aaagtctcaggcccaaaacgttgcttcgccatcaagtcgtttgagagaagagtgaaagca
ctagaaaaagccgatccacggaatgagaaaactaggaaaggacaacctggcaacaacacc
cgcaaactgttcgacggggaggagatgtgctacatcatcgacgccagacaggagggcaac
ctcgggcgattcatcaatcatagctgcagtcccaatttgtttgtccagaatgtttttgtg
gacacacatgatctccggttcccctgggttgcgttctttgccaacaagcgcatcaaagct
ggcacggagatgacgtgggattataactatgaggtgggcagcgtggagggcaaggttctg
ctctgctgctgtggttcatcacggtgcacaggacggctgctctga
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integrated database retrieval system
