Triplophysa rosa: 130570222
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Entry
130570222 CDS
T09216
Symbol
trpc6a
Name
(RefSeq) short transient receptor potential channel 6a isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130570222 (trpc6a)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130570222 (trpc6a)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
RIN1
Motif
Other DBs
NCBI-GeneID:
130570222
NCBI-ProteinID:
XP_057216405
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Position
LG19:12843349..12850853
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AA seq
878 aa
AA seq
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MNQRRLVLEDKNQSRYHTTEKRNRSKDNLLMNEDFADDSYGCYGYYHSETLARQMLAKSR
RQAVRGAAYMFNAHPNSLTPLEERFLDAAEYGNIPVVRRMLEEIPDLDVNCVDYMGQNAL
QLAVANEHLEVTELLLEKDNLSRIGDALLLAISKGYTRIVEAILSHKAFADYKRLTASPS
QAPIHDDFFAYDEDGTRFSHDITPIILASHCHEYEIVHILLGKGARIEQPHDYFCTCDTC
NYHQKYDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELASLANIEKEFKNEY
RKLSIQCKDFVVGLLDLCRSTKEVEAILNGEEDETLDAPGRPSLIRLKLAIKYELKKFVA
HPNCQQQLLSIWYENLPELRQQSTAIKLLVVLGVAMGLPVLAMVYWVAPCSKMGKIMRGP
FLKFVAQVASFTIFLGLLVMNAADRFGGTKLLPNMTIHDYPTQLFRMKTTPFTWMEMLII
SWVVGMIWAECKEIWSQGPREYLLEPWNLLDFGMLAIFVASFISRIMAFWHACAAQHYVD
QHYTDLTNVILPAEVGYFQLARIDWLPSDPQLVSEGLYAIAVVLSFSRIAYILPANESFG
PLQISLGRTVKDIFKFMVIFILVFLAFMFGMFNLYSYYLGAKPNDAFTTVEESFKTLFWA
IFGLSEVRSVVVNNGHIFIENTGYVLYGVYNVTVVIVLLNMLIAMINNSFQEIEDDADVE
WKFARAKLWFTYFEEGRTLPVPFNLIPSPKSFLGLVTGVKGLLHELLDRHKAIMKGSELH
ELGQNKANKDKNLTNSSRYQARSVKIMKRLVKRYIIKAQTDKECDEINEGELKEIKQDIS
SLRYELLEEKSHNLEELAELVRKLEENLSQDSLTQKTH
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagagaagactcgttctggaggacaaaaatcaatcaaggtatcatacgactgaa
aagaggaatcgaagtaaagacaatttactgatgaatgaagactttgctgacgactcttat
ggctgttacggatactaccatagtgagaccctggcccgacagatgctagccaagagcagg
agacaggctgtgcgaggggcagcctacatgttcaatgcccaccccaacagcctaacacct
ttagaagaacgtttccttgatgccgccgaatatggaaacatacctgttgtgcgtagaatg
ctggaggagattcccgatctggatgttaactgtgtggactatatgggccagaatgcattg
cagttggcagtggctaatgaacacttagaagtaacagaacttttgttagagaaagataat
ctatcacgtataggggatgcacttttgttggccattagtaaaggctacacaaggattgtg
gaggccatactgagccacaaagctttcgctgactacaagcgacttacagcaagccccagt
caagcacccatacacgatgacttctttgcctatgacgaagacggtacacgcttttctcat
gacatcactccaatcattctagcatctcactgccacgagtacgagatcgtgcacatactt
ttgggaaaaggtgctcgtattgagcagccacatgactacttttgtacatgtgacacttgc
aattatcatcaaaagtatgattcttttagccactcacgctcacgtatcaacgcctatagg
ggattggccagtccggcttacctctcactgtccaatgaggatcctgtgttggcggcactg
gagctcagtaatgagcttgcctctttggccaatattgaaaaagaatttaagaatgaatat
aggaaactttctatccaatgcaaagactttgttgtgggacttctggacttgtgccggagc
accaaagaggtggaagcgatattgaatggtgaagaggatgagaccttagatgcgcctgga
cggccaagtctcattcgcttaaaacttgcaataaagtacgaactgaaaaagtttgtggct
catcctaactgtcaacaacagctcttatcaatatggtatgaaaacctgccagaactgagg
cagcagagcacagctataaagctcctggtggttttaggtgttgcaatgggactgcctgtc
ctggctatggtgtactgggtggcaccatgcagcaagatgggaaagatcatgcgtggtcct
ttccttaagtttgtggcccaagtagcctccttcactattttccttggccttttggtcatg
aatgctgcagaccgctttggtgggacaaagctgcttccaaatatgaccattcacgactat
ccgacgcagctgttccgtatgaaaacaactccctttacgtggatggaaatgctcatcatt
tcttgggtcgtagggatgatttgggcagaatgcaaggaaatctggtcacagggtccgagg
gaatatctacttgagccttggaatttgctagactttggaatgttggccatttttgtggca
tccttcatctcaaggataatggctttctggcatgcgtgtgcagctcagcattatgttgat
caacactacacagacctaacaaatgtaattttgcctgctgaggtgggatacttccagctg
gctcggattgactggctgccgtccgatccacagttagtttcagagggcctgtatgccatc
gcagtggttttgagcttttctcgaattgcatacatcctcccagctaatgagagcttcgga
ccgctgcagatatctttgggccgaactgtgaaggacatcttcaagttcatggttatcttc
atccttgtctttttggccttcatgttcgggatgttcaacctctattcttattacttgggg
gctaaaccgaatgatgctttcaccactgtagaagaaagcttcaaaacattgttttgggca
atatttggcctttctgaggtcaggtctgtagttgtgaacaacggacacattttcatcgag
aacactggctatgttctctatggcgtatataatgtcaccgtggtcatcgtcctactcaac
atgctcattgccatgatcaacaattcatttcaggagatcgaggatgatgcagatgtggag
tggaagtttgcccgtgccaagctctggttcacctattttgaagagggcaggactcttcct
gtgccatttaacctaataccgagtcctaagtcttttttgggtctggtgacgggggtaaag
ggactcctgcatgagctcctcgacagacacaaagccatcatgaaggggtctgagcttcat
gagttgggacaaaacaaagccaacaaggataagaatcttaccaactccagtcgatatcaa
gcacgtagtgttaaaatcatgaagcgcctggttaaacgctatatcattaaagctcagact
gacaaagaatgtgatgaaatcaatgagggtgaactgaaggagattaagcaagacatttca
agccttcggtatgagctgctggaggagaagtcccataacctggaggagctggctgagcta
gtgaggaaacttgaagaaaatctctctcaggattctctcacacagaagactcactga
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