Takifugu rubripes (torafugu): 100101242
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Entry
100101242 CDS
T02386
Symbol
plod3
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 precursor
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru00310
Lysine degradation
tru00514
Other types of O-glycan biosynthesis
tru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100101242 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100101242 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tru01003
]
100101242 (plod3)
Enzymes [BR:
tru01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
100101242 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100101242 (plod3)
2.4.1.66 procollagen glucosyltransferase
100101242 (plod3)
Glycosyltransferases [BR:
tru01003
]
O-Glycan biosynthesis
O-linked Gal type
100101242 (plod3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
2OG-FeII_Oxy_3
Anp1
Motif
Other DBs
NCBI-GeneID:
100101242
NCBI-ProteinID:
NP_001093075
Ensembl:
ENSTRUG00000000568
UniProt:
A5A6S2
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All DBs
Position
8:19457215..19461985
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AA seq
731 aa
AA seq
DB search
MFAGRLLSLLALTALHSAASAGRQSLSPENLLVITAATEETDGFNRFMRTAREFNYTVKV
LGLGEEWRGGDVARTVGGGQKVRWLKKELSKHSDKENMVIMFVDSYDVILAAGPEEPLYK
FSRLGHKVVFSAEGFCWPDQRLASKYPEVHSGKRYLNSGGFIGLASELSAIVQQWKYKDN
DDDQLFYTRIYLDKVQRTKFNMTLDHRSRIFQNLNGAVDEVVLKFERSKVRARNVAYDTL
PVVIHGNGPTKLQLNYLGNYVPTAWTFAGGCGICDDELRLLNEDEEMPLVHVGVFIEKAT
PFLEEFLERLTAMSYPTARLRLFIHNNVFYHERHIHRFWERHRALFLDAQLVGPEENLPE
SKARNMAAEACKKDPRCEFYFSIDSDVALTNPDTLRILIEENKSVIAPMLSQHGKLWSNF
WGALSPEGYYSRSEDYIEIVQGKRIGLWNVPYITQVYLIKGSVLRSKLSQLSLFVDEEMD
SDMVFCRNIRDQGIFLFVSNRDEFGRLVTSTNFNTSRLHPDMWQIFDNPLDWKEKYIHEN
YSKVFEEQESFVEQPCPDVYWFPAFSEKMCDHLVETMEDNGQWSSGGHRDERLSGGYENV
PTVDIHMNQIGFEKEWLKFLKEYIAPVTERLYPGYYPKAQAIMNFVVRYHPDEQPFLRPH
HDSSTFTINIALNRKNIDYEGGGCRFLRYNCNVESPRKGWSFMHPGRLTHYHEGLPTTKG
TRYIMVSFVDP
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaggccgcctcctcagcctgctggctctcaccgccctccactccgccgcgtcg
gccggacggcagagcctctcaccggaaaatctgctggtgatcaccgcggcaacagaggag
acggatggctttaaccgttttatgaggacagcaagagagttcaattacaccgtgaaggtc
ctgggtctgggtgaggaatggcgggggggcgatgtggctcggacagtaggaggtggtcag
aaggtccgatggctgaagaaagagctgagcaaacactccgacaaggagaacatggtcatc
atgtttgttgacagctatgacgtgatcttggcggcgggtccagaagagccgctctacaag
ttttcccgtctgggtcacaaagtggttttctcagctgaggggttttgttggcccgaccag
cggctggcctccaagtaccccgaggtgcattctgggaaacgctacctaaactcaggaggg
ttcatcggcttggcctcggagctgagcgccatcgttcaacaatggaagtacaaagacaac
gacgatgaccagctgttctacaccaggatctacctggacaaagtgcagaggacaaaattc
aacatgactctggaccatcgctccagaatcttccagaacctgaatggagccgttgatgaa
gttgtcttgaagttcgaacggtcaaaggtcagagccagaaacgtggcgtacgacacactt
cctgttgtgattcacggcaacgggcccaccaagctgcagctgaactacctggggaactac
gttcccacggcctggaccttcgccggcggctgtgggatctgtgacgacgagctgcggttg
ctgaacgaggatgaggagatgccgttggtccacgtcggggtgttcattgagaaggccacg
cccttcctggaggagttcctggagcggctgacggcgatgagctacccaacggccaggctc
cgcctcttcatccacaacaacgtgttttaccacgagcgccacatccacaggttctgggag
cgccaccgcgccctcttcctggacgcccagctggtcggacctgaggagaacctgccggag
agcaaggcccgaaacatggcggccgaggcgtgcaagaaggacccccgctgcgagttctac
ttcagcatcgactcggacgtggcgctgaccaaccccgacaccctcaggatcctgatcgag
gaaaacaaatccgtcatcgcgcccatgttgtcccaacacgggaagctgtggagcaacttc
tggggggcgctgagtccggagggctactactccaggtctgaagactacatcgagattgtc
cagggaaaaaggatagggctgtggaacgttccatacatcacgcaggtgtacctgatcaaa
ggcagcgtcctgcggtccaaactgtcccagctcagcctgttcgtggacgaggagatggat
tcagacatggtcttctgcaggaacatcagggaccagggcattttcttgtttgtgtccaac
cgagacgagtttggacgtctggtgacgtcaaccaatttcaacacgtccagacttcatcct
gacatgtggcagatctttgacaaccctctggactggaaggagaagtacatccatgagaac
tactccaaggtgtttgaggagcaggagagctttgtggagcagccctgtccagatgtttac
tggttcccagcattctccgagaagatgtgtgaccatctggtggagaccatggaggacaat
ggccagtggtcctcaggaggccacagggatgagcgtctgagcggaggctacgagaacgtc
cccactgtggacatccacatgaaccagatcggctttgaaaaggagtggctcaagttcctg
aaggagtacatcgcgcctgtgacggagcggctgtacccgggctactaccccaaggctcag
gccatcatgaactttgtggtgcgttatcatcctgacgagcagccgtttctccgaccacat
cacgactcgtctacattcaccatcaacatcgccctgaacaggaagaacatcgactatgag
ggtggaggctgcaggttcctgcgctacaactgtaatgtggagtctccaaggaagggctgg
tccttcatgcacccgggtcgcctgacgcattaccacgagggtcttcccaccaccaaaggg
acccgctacatcatggtgtcctttgtggacccatag
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