Takifugu rubripes (torafugu): 101061772 Help Entry 101061772         CDS       T02386                                  Symbol thbs1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism tru  Takifugu rubripes (torafugu) Pathway tru04115   p53 signaling pathway tru04145   Phagosome tru04148   Efferocytosis tru04350   TGF-beta signaling pathway tru04510   Focal adhesion tru04512   ECM-receptor interaction tru04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tru00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     101061772 (thbs1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101061772 (thbs1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     101061772 (thbs1)    04148 Efferocytosis     101061772 (thbs1)   09143 Cell growth and death    04115 p53 signaling pathway     101061772 (thbs1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     101061772 (thbs1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101061772 (thbs1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tru04131]     101061772 (thbs1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tru00536]     101061772 (thbs1) Membrane trafficking [BR:tru04131]  Endocytosis   Phagocytosis    Opsonins     101061772 (thbs1) Glycosaminoglycan binding proteins [BR:tru00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101061772 (thbs1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS EGF_3 TSP1_CFP_C cEGF Laminin_G_3 EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  101061772 NCBI-ProteinID:  XP_003962650 Ensembl:  ENSTRUG00000014573 UniProt:  H2UJX9 LinkDB All DBs Position 2:complement(10135523..10143409) Genome browser AA seq 1172 aa AA seqDB search MMLCGIFLLLMLSGCGGARLAGSADDNSVYDLFDLARVSKRQNGVTLVKGADPYSPAYKV LNADLIPSVPDSSFRDILDSILAERGFLLIINLKQFKRSRGSILTIEKNDGSGSVFEIVS NGRANSLDVVYSIANQQQIASIEDADLATGHWKNITLFVQDDRVKLYVGCEEVNEAEMDL PIHKVLSQDLADIATLRIAKGAVRDKFTGVLQNVRFVFGTSLDAILRNKGCQNGAMLTDV MTLDNPINGSSPSVGSDYTGQKPKDVQPVCGLSCEEISSMFRELRGIGVVVKRLSIDLRK VSEESMLLKNQMNSQSGICIHNGIVYQDKDEWTVDSCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGSSMVSDQGGWSPWSAWTQCSVTCGRGIQQRGRSCDRINSDCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGMDCQGEG RQTEICHKSPCPIDGGWGPWSPWDTCTLTCGKGIQTRKRLCSDPAPKFGGMDCVGEAKMS QVCNKQDCPIDGCLSNPCFPGAKCTSFPDGSFRCGRCPLGYTGDGITCRDIDECKAVPDA CHIHNGVHLCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCH KNANCIYLGVYSESMFRCECKPGYAGNGHICGEDTDLDGWPNHDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDECDTDDDNDRIPDDRDNCPRLYNPAQYDADRDDVGDRCDNCV YEANTDQTDTDNNGEGDACAVDIDGDGVLNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQTDSDGDGRGDICKDDFDQDNVLDIYDVCPENFAISETDFR RFQMVPLDPTGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSTTPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctctgtggcatctttttactgctgatgctttcgggctgtggaggcgccagactg gctggcagcgcagatgataacagtgtctatgacctatttgatctggctcgggtcagcaag cggcagaatggagtaaccctggtcaaaggtgcagatccttacagccctgcctacaaggtt ctgaatgcagacctgatcccctcagtccccgacagctccttcagggacatccttgactcc atcctggctgagaggggcttcctgctcatcatcaacctgaagcagttcaagagaagccga ggcagcattttgaccattgagaagaatgacggctcaggatccgtttttgagattgtttcc aatgggagggcgaactcgctggatgtggtctactccattgccaaccagcagcagattgcg tctatcgaggatgcagatttggccacaggacactggaagaacatcacgctgtttgttcag gatgaccgagtgaagctttacgtgggctgcgaggaggtcaatgaggcagagatggatttg cccatccacaaggtgctatcccaggacctggcggacatcgctaccctcaggatcgcaaag ggagccgtgagggacaaattcacgggagtgctacagaatgtgcgctttgtttttgggacc tcacttgatgccattttgagaaacaaaggatgccagaatggagccatgttaactgatgtc atgaccctggacaaccctatcaatgggtccagcccctccgtcgggagtgattatactggc caaaagcccaaagatgtccagcctgtctgtggcttgtcttgcgaagaaatctccagcatg tttagggagctcaggggaatcggtgtggtcgtgaaaagactgtctattgacctgcgcaaa gtgtctgaggaaagcatgctgctgaaaaatcaaatgaacagccaaagcggaatctgcatc cacaacggcattgtgtaccaggacaaagacgagtggacggtggacagctgcaccgagtgc acctgccagaactctgctactgtgtgtcgtaaaatctcctgccccctgatcccgtgtgct aacgctaccgtgcctgacggagagtgctgccctcgctgcgggagttcaatggtttctgat cagggtgggtggtctccctggtctgcatggacccagtgttctgtgacgtgtggtcgaggc atccagcagcgcggacgctcctgcgaccgcatcaacagcgactgcgagggcacttctgtc cagacccgcgactgctacccccaggaatgcgacaaacgattcaaacaggatggtggttgg agccactggtctccctggtcatcatgctctgtaacctgtggtgagggggtcatcacccgg atacgcctctgcaactcccccacaccccagatgggtggcatggactgccagggtgaagga cgtcaaactgaaatctgccacaagtcaccttgtcccatcgatggaggttggggaccttgg tcaccatgggacacctgcactctcacctgtggcaaaggaattcagacccgcaagcgtctc tgctcagaccctgcccccaaatttggaggaatggactgtgttggtgaggctaagatgtct caagtgtgcaacaaacaagactgtcctattgatggttgtctgtccaacccttgcttccct ggggcgaagtgcaccagtttccccgacggctccttccgttgtggcaggtgtccacttggc tacactggagacggcatcacttgcagagacattgatgagtgcaaagcagtccctgatgcc tgccacattcataacggagtccacctgtgtgagaacacagaaccaggttacaactgcctg ccctgcccagcacggttctctggccctcagccctttgggcggggagtggagcaagcaact gccaaaaagcaggtgtgcaaaccacgtaatccttgtcaggatggaagccacgactgccat aaaaatgcaaactgcatttacttgggggtctacagtgagtccatgttccgctgtgagtgc aaacctgggtatgcaggaaacggtcatatttgtggagaggacactgaccttgacggatgg cccaaccacgacttgttgtgtgtcgagaatgccacctaccactgcaagaaggacaactgc cccaatcttcccaactctggccaggaggatcatgacaaagatggtctgggtgatgaatgt gacacggatgatgacaatgacaggattccagatgatagggacaactgcccaagactgtac aaccctgcccagtatgacgcagacagagatgatgtcggcgatcgctgtgacaactgtgtt tacgaggctaacactgaccaaactgacaccgacaataacggagagggtgatgcctgcgct gtcgacattgatggtgacggtgttctgaatgagaacgacaattgcccgtatgtttataac gtggatcagagggatactgacagggacggcgtgggtgaccactgtgacaactgccctctg gaacacaaccctgatcagattgattcagactcagatcgcgtaggagacaagtgcgataac aaccaggacattgacgaggatggtcaccagaacaacttggacaactgcccctacataccc aacgccaaccaggctgaccacgacaaggacggaaagggtgacgcttgtgaccacgacgat gacaacgatggcattcctgacgacaaagacaactgtaggctggcgttcaaccctgatcag acagattctgatggcgatggccgtggtgatatctgcaaagatgactttgatcaagacaac gttttggatatttatgatgtgtgccctgagaattttgccatcagtgaaactgatttccgt agattccaaatggttcctttagacccaacaggcacctcgcagatcgaccctaactgggtg gtgcggcatcagggcaaagagttggtacagaccgtcaactgcgaccctggcattgctgtt ggttatgatgagttcagtgcagtggatttcagtggaaccttcttcattaacacggacaga gacgatgactatgcggggttcgtgttcggttaccagtccagctcgcgattctacacggtg atgtggaaacagatcacacagacctactggtccaccacacccacaaaagctcagggttac tctggcctgtcaatcaaagttgttaattccaccactggacctggcgagcacttgaggaac gccctgtggcacaccggagacaccccaggacaggtacgtactctgtggcatgaccccaag aacattggctggaaggacttcacagcctacaggtggcatctgacccacagacccaaaact ggacttattagagtggtcatgtatgaaggcaaaagaatcatggccgattctggaaacatc tacgacaagacgtacgctggtgggcgactgggcctatacgtgttctctcaggagatggtt tacttctctgatctgaaatatgaatgcagagacacataa

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