Takifugu rubripes (torafugu): 101064828
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Entry
101064828 CDS
T02386
Symbol
brca1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03440
Homologous recombination
tru03460
Fanconi anemia pathway
tru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101064828 (brca1)
09124 Replication and repair
03440 Homologous recombination
101064828 (brca1)
03460 Fanconi anemia pathway
101064828 (brca1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tru01009
]
101064828 (brca1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101064828 (brca1)
03036 Chromosome and associated proteins [BR:
tru03036
]
101064828 (brca1)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101064828 (brca1)
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101064828 (brca1)
Protein phosphatases and associated proteins [BR:
tru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101064828 (brca1)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101064828 (brca1)
Multi subunit type E3
BRCC complex
101064828 (brca1)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101064828 (brca1)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101064828 (brca1)
BRCA1-A complex
101064828 (brca1)
BRCA1-B complex
101064828 (brca1)
BRCA1-C complex
101064828 (brca1)
BRCA complex
101064828 (brca1)
FA (Fanconi anemia) pathway
Downstream FA components
101064828 (brca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
BRCT_2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
RTT107_BRCT_5
RING_XB3-XBAT31
zf-RING_2
zf-Nse
zf-RING_5
zf-RING_6
zf-RING_4
zf-MIZ
zf-ANAPC11
TRAF3_RING
PTCB-BRCT
YicC-like_C
Sina_RING
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
101064828
NCBI-ProteinID:
XP_003961307
Ensembl:
ENSTRUG00000009091
UniProt:
A0A3B5JYS4
LinkDB
All DBs
Position
1:complement(5738407..5757610)
Genome browser
AA seq
1338 aa
AA seq
DB search
MRCVSCCYLSTTFGGANRGGYRAMLNKGEEDFSCGKTEACHFWNCTLHLRENKDIKIITM
EAAKAADVKKGISVLWESLQCPICLDILTAPVSTKCDHQFCKFCISKLLSNTKQNKANCP
VCKSKITKRSLQESPGFQRLVTGLQGMILAYENDTGTNYFTGLSRQTQQPHVADIKNAQH
HKEQSDENASCTEDDNEDLPKSYSSTRAAQDGFARLMGLEDTSPLTTEIDGLDSGLGEAP
PTCDKKMYSPRKLEKVSFQPALIPDKDEHPHLQTPSKKKHKKVLEPDKILDQKQKKSLEK
VAEWLMKVPSEQSLELENLDEDGDDSDSCSSTSTIDLGLLRCESNPMRARGKALEDQVFG
AIYKRQRRGKGIVKPIEAALEMVCLNHSDKNTSEDKSREDKEEVHSIREQEQNTSSNILK
EEIAVLEDCGGIVEPTHMSENDQNNKDEVPHLVSDIGQQQPETIAKRTRSSLQQVDCDLL
KCTQKKPEDSGKKKIAQRGSKGIKSEKSKSARMSKPLVLVTVEKLDTSPKIRPQSEKVEV
HIENYPSSGDQEVPLGRCTRKSRRLQVFTKEDDKKETSRFNVPEKQHNSKYPNFECEILD
NIKSQNCKYQTQQANRNGCIYNQGIQEIENMDSGERASSLRSEEDTKTSLSEVQNTEILS
ETPRCVAVFPSCAELAPAEPTNQPPNTVQLVTELAEKEREQQNDSEQDTEQLVRSFKATK
RKSFHLGTGPNMKRSHLLVHENTQSPGTEENENYYESLPKQVQPVMAKITNSQVLIDSQN
MSGSDLISPSCSPSLTRKALGLQSRCSVEVGNCVLGNSASSPLSPNNESKHVVQSSSPLI
LTKGNSTICFATEKPSQISESKTDFIMMKETRGNTSLHSFNGSTAEELLDAQSSLTPDGL
GMPVPEVTYSQGSRELSRCRKRTKSQKLDSSSDCTEEEFPCFSKILNKTAPPGANPPASP
SLDCVNSSQASVDLFDMPNECAINNVESSQFSSEVLVTQQKIEMKKELVRLEKLMALVTE
VLHEKETSPAKNIKNKTNLSSKITGSDADKLRPNVQDEDFNQETFPEEALEPNTRYSDAP
PSGSKHSRTTEMNSRTSNTVGLSSAAKTDGSPSAGHEDKENNKPEGDRSQAKMLLVTSGL
GASEQITVKKFAKRIGAVVVSQVTPEVTHIVMHTDEQLVCERTLKYFLGIAGRKWVVSFQ
WISECFKQKKLLNESTFEVRGDVVNGSNHQGPMKARTTGDNNLLMKDFNICFQGPFTDMT
TAEMELMVELCGATVVKDPLLLHSKPTHHQLIIVQSGSESYKSLSRKATVVTRGWLLDTV
ATYTIQDFRTYRADLRAA
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtgtatcgtgttgttacctctccacaacgtttggtggcgctaatcgcggtgga
tacagagcgatgttgaataaaggagaagaagattttagttgcgggaaaactgaagcttgt
catttctggaattgtacgcttcatctacgagaaaataaggacattaaaataatcaccatg
gaagcagcaaaagccgcagatgttaagaaagggatttcagtgctttgggagagtctacag
tgtccaatatgcttggatatattgactgcacctgtatctaccaagtgtgaccatcaattt
tgcaaattctgtatctcgaaacttttaagcaacaccaaacaaaacaaggctaactgtcca
gtatgcaaatccaagataaccaaaaggagcttacaagagagccctgggtttcaaagactt
gtcacaggattacagggaatgattctggcatatgaaaatgacacaggcacaaactatttt
actgggctgtccaggcaaacacagcaaccacatgttgcagatatcaaaaatgctcaacat
cataaggaacaatcagatgaaaatgcttcctgtacggaagatgataatgaagatcttcca
aagtcttattcttcaactagagcagcccaggatggatttgcaaggcttatgggcctagaa
gacacaagtcctctgactacagaaatcgatggcctggacagtggtcttggagaggccccg
ccaacttgtgacaaaaaaatgtacagcccaagaaagttggagaaggtttcctttcagcca
gcattaataccagataaggatgaacacccacatttacaaacaccttcaaagaagaagcat
aaaaaggttttagagcctgataagattctcgatcagaaacagaagaaaagtctagagaaa
gttgcagagtggctcatgaaagttccatccgagcaaagcctggaattggagaacctggat
gaagatggcgatgactccgacagctgctcatccacctcaacaatagatcttgggctactc
cgctgtgaatcaaatcctatgagagctcgtggaaaagccctggaagatcaggtgtttggg
gcgatttataaaagacagcgaagagggaagggaatcgtaaaaccgatagaagcggcactc
gaaatggtttgtttaaatcattctgacaaaaatacctctgaagataaaagcagagaagat
aaggaagaggtgcactcgataagagagcaagaacaaaacaccagtagcaacatattaaaa
gaagagattgcagtcttggaggattgtggaggaatcgttgagccaactcacatgtcagaa
aatgatcaaaacaacaaagatgaagtacctcatctagtttctgatattggacaacagcaa
ccagaaaccattgcaaagagaacacggtcttctctgcagcaagtcgactgtgatttgttg
aagtgcacacaaaaaaagccagaagatagtgggaaaaagaaaattgcccagagaggaagt
aaaggcatcaagtctgaaaaatcaaagtctgccagaatgtcaaaaccgcttgttttggtt
acggttgaaaagctagacactagtcccaagattagaccgcagtcagaaaaagttgaagtt
cacattgaaaactatcccagcagtggtgaccaagaagttcctttagggagatgtaccagg
aaaagtagaagacttcaggtcttcactaaggaagatgacaagaaagaaacatcaagattc
aatgtcccagaaaaacaacacaattcaaaataccccaactttgaatgtgaaatactggat
aatatcaaatcacaaaattgtaaataccaaacacaacaagcaaacagaaatggatgtatt
tataatcaaggtatccaagaaatagaaaacatggattctggtgagagagcatcttctttg
agatcagaagaagatactaaaacttctctttctgaagtccaaaataccgaaattttgtct
gaaactcctcgctgcgtcgctgtgttcccaagttgtgctgaactagctccggcagaacca
actaatcaacccccaaatactgtccagttggtgactgaactcgctgaaaaggaacgcgag
caacagaacgatagtgagcaggacacagaacagttggtcaggagctttaaagctactaaa
agaaaatctttccatctcggtactggtccaaatatgaaaaggagccatttattagttcat
gaaaacacccaaagtccaggaactgaagagaacgaaaattattatgaatctttgccaaaa
caagtgcagccagtgatggctaaaataaccaacagtcaggttttaattgacagtcaaaac
atgtctggtagtgacttgatctcaccgtcctgctcacccagcctgacgagaaaagccttg
ggccttcaaagcagatgttcagtggaagttggaaattgtgtcctcggtaatagtgccagt
agccccctttctcctaataacgaatcgaagcatgtagtacaaagttcctctcctctcata
ctaacaaagggaaactcgacaatctgctttgcaactgaaaaaccttctcaaatttcagag
agcaaaactgattttataatgatgaaggagacacgaggtaatacttcactgcacagtttt
aatggcagcactgctgaggaacttttagatgcacagtcgtcattaaccccggatggcctg
ggaatgccagtcccagaggtgacatacagccaagggagcagagagctcagcaggtgcagg
aaaaggacaaagtctcagaagctggactcttcatcagattgtacagaagaggaatttcca
tgtttttcaaaaatcctcaacaaaactgccccccctggtgctaatcctccagcaagtccc
agccttgattgtgttaattccagccaagcatctgtggacttgtttgacatgccaaatgag
tgtgccataaataatgtcgagtcatcgcaattttcaagcgaggtccttgttacgcagcaa
aaaatagagatgaagaaggagctggtgaggttggaaaagttgatggcactggtgacagag
gtgctacacgagaaggaaaccagcccagcaaaaaacatcaagaataaaaccaacctgagc
agcaaaataacaggctcagatgctgacaaactgcgcccgaatgtccaggatgaagatttt
aaccaagaaacattcccagaagaagcactagaacccaacacaagatattctgatgcgcct
ccttctggttccaagcacagcaggacgacagagatgaactccagaacatccaacacagtt
gggttaagttcagctgcaaagactgatggttccccatcagccggccacgaagacaaagaa
aataacaagcctgagggagacagaagccaagccaagatgctcctggtgacgtctggactg
ggcgccagtgaacagataacagtgaaaaagttcgctaagcggattggcgccgttgtggtc
tcccaggtgacaccagaggtgactcacattgtcatgcacacagatgaacaactggtgtgt
gagcgcacactgaagtactttcttggaattgcgggccggaagtgggtggtgagcttccaa
tggatttcggagtgcttcaaacaaaagaaacttttaaatgagagtacctttgaagtgaga
ggtgatgtagttaatggatccaaccaccagggcccaatgaaagctcgaacaacaggagac
aacaatttgctgatgaaagacttcaatatctgttttcaggggccttttacagacatgacc
acagctgaaatggagttgatggttgagctgtgtggagcgactgttgtcaaagatccactt
ctgctccacagtaaaccgactcatcatcagctgatcatcgttcagtccggatcagaatcc
tacaagagcctctctagaaaggctacagttgtgactcgggggtggctgttggacaccgtg
gcaacctacaccatccaagacttcaggacctacagagctgacctgagagccgcctga
DBGET
integrated database retrieval system
