Takifugu rubripes (torafugu): 101067326
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Entry
101067326 CDS
T02386
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101067326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tru03400
]
101067326
Enzymes [BR:
tru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
101067326
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101067326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AT_hook
XRCC4_C
Motif
Other DBs
NCBI-GeneID:
101067326
NCBI-ProteinID:
XP_011605356
Ensembl:
ENSTRUG00000015289
LinkDB
All DBs
Position
9:6200632..6203436
Genome browser
AA seq
401 aa
AA seq
DB search
MYDRYQPSQEQPENQYVLSYPSTVIPRDGPVMSGHQVSDDQNHLTEAAYQYHSRNHADQN
HPWESSCNHHLLEQAYQNYSTEPAYQNPVHHPSLQHHHPAQQRLPQPVAGSILPEPPPAA
PPPDVTPTKKKRGRPAKCVETEQRQRTEVEASKKAKRVLNRFDGMSVDEVMARTLPDVIA
PNLDILIIGINPGLLSAYKGHHYPNPGNHFWKCLFLSGFTEKQLNYSHDQSLPEIYGIGF
TNMVERTTPGSKDLSNKEIREGGRQLLAKLQKYKPLIAAFNGKGIYEIFCKETFGVKAKN
LDFGLQPYRIPDTETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKELRDQMKGVAPRSDVQ
ETQYSFDLQLAKEDGKRMAIKEEQEDPEYESCSGQQRLASS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacaggtatcagcccagccaggagcaacctgaaaaccagtatgtcttgtcgtat
cccagtacagtcattccacgggatggacctgtcatgtctggacaccaggtgtctgatgat
cagaaccacctcacagaagcagcctatcagtaccacagtaggaaccatgccgatcagaac
cacccatgggaatcatcctgtaatcatcatctcttagaacaggcctatcagaattattca
acagaaccagcttatcagaatccagtccatcacccttctctccagcaccatcatccagct
cagcagcggctccctcaacctgtagcagggagcattctccccgagcctccacctgctgct
ccacctccagacgtgacacccacgaagaagaagagaggccgacctgctaagtgtgttgaa
acagagcagagacagagaaccgaggtcgaagcttccaaaaaggccaagagagttctgaac
cgatttgatggcatgtcggtcgatgaggtcatggcccggacgctgccagacgtcattgct
ccaaacctcgacattctgatcattgggatcaacccaggactgctgtcagcctacaaaggg
caccattaccccaaccctggaaaccatttctggaaatgtctctttctgtcagggttcaca
gaaaaacagctgaattactcacatgaccagagtcttccagagatctatggcatcggtttc
accaacatggtggagagaaccacaccgggcagcaaggacttgtccaataaggagattcgt
gaaggaggtcgacagttgctggcaaagttgcagaaatacaaacctttaattgcggcattt
aatggaaaaggaatttatgagatcttctgcaaagaaacatttggtgtgaaagctaaaaac
ctggacttcggcctgcagccctacagaattccggatactgagacagtgtgctatctgatg
ccctcgtctagtccccgctgtgcacagttcccgcgtgcacaagataaagttcatttctac
atcaagctgaaggagctgcgggaccaaatgaagggtgtggctccaaggagcgacgtgcag
gagacacagtactccttcgacctgcagcttgccaaagaagatggcaagaggatggccatc
aaagaggagcaggaagatcctgagtatgagagctgcagcgggcagcagcgcctcgcctcc
tcctga
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