Takifugu rubripes (torafugu): 101071817
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Entry
101071817 CDS
T02386
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X2
KO
K08536
liver X receptor alpha
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03320
PPAR signaling pathway
tru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101071817 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
101071817 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101071817 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tru03310
]
101071817 (nr1h3)
Transcription factors [BR:
tru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101071817 (nr1h3)
Nuclear receptors [BR:
tru03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
101071817 (nr1h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
101071817
NCBI-ProteinID:
XP_003969673
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Position
13:complement(13474615..13481517)
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AA seq
452 aa
AA seq
DB search
MSTLSVTDIRDVGHDESKVFDGPSELQLDCVVEESSRSAPLKLALTDLSRPDDFPGPPQN
GPALPVEPSEIKLDPAAAETSAGSDGQPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVL
SCEGCKGFFRRSVIKSAQYSCKNNGHCEMDMYMRRKCQQCRLRKCREAGMLEHCVLSEEQ
IRLKKMKKQEEETARTSTEVAPTPPQEVATLDPQQQEMIEKLVAMQKQCNKRSFLDRPKV
TPWPQSQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTI
EIMLLETSRRYNPSIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGMNDLHLDEAE
YALLIAINIFSADRPNVQDHDLVERLQQPYVDLLRSYIMIKRPNDHLMFPRMLMKLVSLR
TLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctatcagtgactgatatccgagatgttggtcatgatgagagtaaggtgttc
gacgggccctctgagctgcagctggactgcgtggttgaggagagcagcaggagcgccccg
ctgaagctagcactgaccgacctctcccggccagatgacttccccggcccccctcaaaac
ggccccgctctgcccgtggagcccagcgaaatcaagctggatccagctgcggccgagaca
tctgccggctcagatgggcagccggtgaagaggaagaaggggcctgctcccaagatgctc
ggcaacgaggtgtgcagcgtgtgcggcgacaaggcctccggcttccactacaacgtcctg
agctgcgaaggctgcaagggcttctttcgccgcagcgtcattaaaagtgcgcagtactcg
tgcaagaacaacggccactgtgagatggacatgtacatgcgccgcaagtgccagcagtgt
cggctgcgcaagtgccgggaggcgggcatgctggagcactgtgtgctctctgaggagcaa
atcaggctgaagaagatgaagaagcaggaggaggaaaccgcccgcacgtccacggaggtc
gccccgacccccccgcaggaagtggccacgctggacccccagcagcaggaaatgatcgag
aagctcgtggccatgcagaagcaatgcaacaagaggtctttcctcgaccggcccaaagtg
acgccgtggccgcagagtcaggacttgcagaaccgagaagtgcgtcagcagcggttcgcc
cacttcaccgagctggccatcatgtcggtgcaggagatcgtggattttgccaagcagctt
cctggtttcttggagctgacgcgggaggatcagatcgctctactgaagacttcgaccatc
gagatcatgctgctggagacgtcccggcggtacaatccctccatcgacagcatcaccttc
ctgaaagacttcagctataataaggaggattttgccaaagcagggcttcagttcgaattc
atcaatccgatctttgagttctcgaaagggatgaacgatctgcatctggacgaggccgaa
tacgccctcctcattgccattaatatcttctccgcagatcgtcccaacgtgcaggatcac
gacctggtggagcggctccagcagccgtacgttgacctcctgcgctcttacatcatgata
aagagaccaaacgatcacctgatgtttccccgcatgctgatgaagctggtgagcctgcgc
acgctcagcagcgtccactcggagcaggttttcgccctccgcctccaggacaagaagctt
ccgccgctgctgtctgagatctgggacgtgaacgagtga
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