Takifugu rubripes (torafugu): 101075964
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Entry
101075964 CDS
T02386
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101075964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101075964
04121 Ubiquitin system [BR:
tru04121
]
101075964
03036 Chromosome and associated proteins [BR:
tru03036
]
101075964
Enzymes [BR:
tru01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
101075964
Transcription factors [BR:
tru03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
101075964
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
101075964
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
101075964
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
101075964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
F-box
Cupin_8
LRR_4
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
101075964
NCBI-ProteinID:
XP_011603182
LinkDB
All DBs
Position
6:complement(10953337..10967146)
Genome browser
AA seq
1382 aa
AA seq
DB search
MAQAVEACAGSRRRLRSICRRMYDENDDSSDVEEIVNIRGFSVEEKLVGDGYGAKYVQFL
EGRDFSYEYVQREALRVPLIFKEKDGLGIRMPDPEFSINEIKGLVGSRRSVDVMEVSTQK
GTEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPNL
KHSQTEATNLISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGCKVFWLVPPT
PHNLALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIHEIENRTKVHSKFRFPFYYEMCWYVLERYLNCLTRRSYLSQEFRKE
PVVVADIETKTGSPFSDSRSQDTNEDSCETAQVRDGLCDKPDGFAQDGPCSPDSRRVQNL
KTALSVDSEDSCNPGSTSLDFIQTPLDSPASEPTSRWTHLTGFELSGLRMLVEKLESLPE
NKKCIPEGIENPQALLEDVKAVLKEHADDDPRSAVTGVPVVYRPKKLSKPRPPNRPKSKM
AASPASAVKLSANRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIAPVLPHTAVCLICGEAGKEDTIEDEEEKFHLMLMECSICNEIIHPNCLKVKDSSG
VVNDELPNCWECPKCNQAGKTGKQKRGPGFKYASNLPGSLLKEPRLNRDTREEPDVPMAA
PATVTALNTTCAVKRKAERDDCPKRKEEEPPKKRPLLPSLDAGPRPRLEDNPLRKKRNLF
DTNEEPIMKKKKKLSKLDDSLAQKLLRQIKTENSYSDEEDEQEDHDEDGFPSEGPRVKEK
SEREDENEDYEEGRREATVEVESKVLLSPLLRTSAAREKDQSSSNSPRAGPSSDSGEPQE
RNSAHPKARHQRKRLTAKDPSKEFNQDATRTEDCLSNQNHSPVKKEDGSVNHNRRPLKAE
DSLTNQNRKSLKSGDPNAHPSRRAIKMEESLTNKNRRPLKTEDSLTNQNHQPVKTEPENI
SDQKAKWNLNNGSSDLGDWLRHKGRDVTEKQHGYSPLGWNRSTPIAPICPRPLPCRSPPK
CIQMERHVIRPPPISPPPDKLPLNSGEAHVMRRETWMAVFGHLTHRDLCVCMRVCRTWNR
WCCDKRLWKLINLNRCKSITPLMLSGIIRRQPAALDLSWTNISKKQLSWLINRLPGLRVL
LLSGCSWAAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRSKLRN
VEELRLAGLDITDTTLRLIIRYMPSLSKLDLSYCNHVTDQSVNILTAAGTTTRDSLTDIN
LSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVSKEGCEQFVAEMSVSVQFELIEEKLLQK
IS
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggccgtggaagcgtgtgctggatccaggcgcaggctgcgctccatctgccgg
aggatgtacgatgaaaacgacgactcgtcggacgtcgaggagattgtcaacatcagagga
ttcagtgtggaggagaagctggtcggcgacggctacggcgcaaaatatgtccagtttttg
gaggggagagacttctcatatgaatacgtgcaaagagaggcgctcagggtcccgctcatc
tttaaagagaaggacggactcgggatcagaatgcctgatccagaattttcaattaatgaa
atcaaaggcttagttggcagccgccgctctgtggatgttatggaagtgagcactcagaaa
ggcactgaaatgagcatggctcagtttgtccgttattacgagactcctgaggaggagcgg
gacaaactcttcaatgtcatcagcttagaattcagccacactaagctggagaacctcatc
aagcgtcccacagtggtggatcaagtagactgggtggataacatgtggcctcctaatctg
aaacacagccaaacagaagccaccaatctaatctcagagatgaaatatccgaaagtgcaa
aggtattgtctcatgagcgtaaaaggctgctacacagacttccacattgatttcggggga
acgtctgtttggtatcatgtgtttaagggatgcaaagtgttttggctggtgcctcccacc
cctcataacttggccctttacgaggactgggtcctgtcagggaagcagagtgacatcttc
cttggagaccgagctgatggatgccagagagtggagcttaagcaaggatacaccttcttc
atcccatctggctggatccacgccgtttatacgcctgaggacacgctggtgtttggaggc
aacattctgcacagcttcaacattcctatgcagctgaccatccacgagatcgagaacagg
accaaggttcattccaagttccgtttccccttctactatgagatgtgctggtacgtcctg
gagaggtacctgaactgtctgaccagacggtcctacctgtctcaggagtttcgtaaagag
cccgtagtagtggcagatattgaaactaaaacggggagtcctttctctgattcccggagt
caggacaccaacgaggactcgtgtgagaccgctcaggtcagggacggcctctgcgacaag
ccagacggtttcgcccaagacgggccctgctctccggacagccggagggtccagaacctc
aaaactgccttatcagtggactccgaggacagctgtaatcccggctccacctctttagat
tttatccaaacgcccttggactctcctgcctcggagcccacgagcaggtggactcacttg
acgggatttgagctgagtggcctcaggatgctggtggagaagctggagtcgcttcccgaa
aacaagaaatgcatcccggaagggatagaaaatcctcaggctctgctggaagacgtgaag
gcggttctgaaggaacacgctgatgatgaccccagatcggccgtcaccggagttcctgtg
gtttaccggcccaagaagctctcaaagccccgacctcccaaccggcccaaatccaagatg
gccgcctcccctgcatcggcggtcaagctgtccgccaaccggggaacgtccggcgccagg
aggcgaagaacccgctgtcgcaagtgtgaagcgtgcctgcggacggagtgcggcgagtgc
cacttctgcaaggacatgaagaagttcggcgggccgggccgcatgaagcagtcgtgcatc
atgaggcagtgcatcgcaccggtcctgcctcacacagctgtgtgtctcatctgtggggag
gccggcaaagaagacaccattgaggatgaggaggaaaagttccatctcatgctcatggag
tgctccatctgcaatgagatcattcatcctaattgtctgaaggtcaaagattcgagcggg
gtcgtcaacgatgagctgcccaactgctgggagtgcccgaagtgcaaccaagcagggaag
actggcaaacaaaaacgggggccagggttcaagtatgcgtccaacctgccgggctcccta
ctgaaggaaccgcggctcaaccgggacacgagagaggagcccgatgttccgatggcggct
ccagccaccgtcactgccttgaacaccacatgtgctgtgaagagaaaggccgagcgggac
gattgccccaagaggaaagaagaggaacccccaaagaaacgtcccttgctgccgtctctg
gacgcagggccccgaccgcggctggaggacaacccgctgaggaaaaagaggaaccttttt
gacaccaatgaggagcccatcatgaaaaagaagaagaaattgtcaaaactggacgactcc
ttggctcaaaagctgttgaggcaaatcaaaacagaaaacagctacagcgacgaagaggac
gagcaggaagatcacgacgaagacgggtttccctcagaggggcctcgcgttaaagagaag
agcgagcgtgaagacgagaatgaagattacgaagaggggagaagggaggcgacggtagag
gtcgaatccaaggttctgttaagtcccctgctgagaacatctgcagccagagagaaggac
cagtcctcctccaactcccccagagccgggcccagcagcgactcaggagagcctcaggag
aggaactctgctcacccaaaggctcgccatcagcgaaaacgcctaaccgccaaagacccg
agcaaagagttcaaccaggatgctaccaggacggaagactgtctgtccaaccagaaccac
agtccagtgaagaaagaggacggctcggtcaatcacaacagacggcccctcaaggccgaa
gactctctgaccaaccagaaccgcaagtcgctaaaatcgggggatccaaacgcccatccg
agccgcagggccatcaagatggaagaaagcctgaccaataaaaaccggcgtcccttgaaa
acggaggacagcctcaccaatcagaaccaccagcctgtcaaaaccgagcccgagaacatc
agcgaccagaaggcgaagtggaacctcaacaacggcagcagcgacctcggcgactggctg
cggcacaaaggccgcgacgtgaccgagaagcagcacggctactcgccgctcggctggaac
agaagcacgccgatcgccccgatctgtccccgcccgctcccctgccggtcgccgcccaag
tgcatccaaatggagcgccacgtgatccggcctccgccgatcagccccccgcctgacaaa
ctgccgctgaacagcggcgaggcccacgtgatgcggagggagacgtggatggcggtcttc
ggtcacctgacccacagagatctgtgcgtgtgcatgcgtgtctgcaggacgtggaaccga
tggtgctgtgacaagaggctctggaagctcatcaatctgaaccgctgtaagtccatcacg
cccctcatgctgagcggtatcatccggaggcagccggccgctctggacctcagctggacc
aacatctccaagaaacagctgagctggctcatcaacagacttccaggtttgcgagttctg
ctgctgtctggatgctcctgggcagctgtgtccgctctctgcacctccagttgtcctctc
ctaagaaccctggacgtccaatgggtggagggtctgaaagacgcccagatgagggacctg
ctttcgcctcctacagacaacaggccaggtcagctcgataacagaagcaaactgcggaac
gtggaggagctgcggctggccggcctggacatcacggacacgactctgcgcctcatcata
cgctacatgccctccttgtctaaactggacctcagctactgcaaccacgtcaccgaccag
tcggtcaacatcctgaccgctgcggggaccaccaccagggactcgctcaccgacatcaac
ctgtcagtctgtaacagggtcacagaccagtcgctgacctatttcaagcgctgcggaagc
atctgtcacatcgacttgcgatactgcaaacaggtgagcaaggaaggctgcgagcagttc
gtggccgagatgtctgtgagcgtgcagttcgaactgatcgaggagaagctgctgcagaag
atcagttag
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integrated database retrieval system
