Takifugu rubripes (torafugu): 101076846
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Entry
101076846 CDS
T02386
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tru04040
]
101076846
Ion channels [BR:
tru04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101076846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
101076846
NCBI-ProteinID:
XP_029692072
Ensembl:
ENSTRUG00000000432
LinkDB
All DBs
Position
5:14510241..14548934
Genome browser
AA seq
1719 aa
AA seq
DB search
MRTLLPPVGSEVFRRFTQSSLNEIQQKQQIREEERKRTNAQVSEELPEPASDLEAGKPLP
FIYGEPPHELLNVPLEDIDPFYQSQKTFIVLSKGNIIYRFNAESSLYLLSPFNALRIVAI
KILIHSLFSLFIMATILTNCAFMTLSDPPAWSKTMEYVFTFIYTFEATIKILSRGFCVGK
FTFLKDPWNWLDFMVISMAYLTELVDLGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQ
SVRKLADAMVLTVFCLSVFALIGLQLFMGNLRQKCVLIPQWLYGNLTFDINSTNGYYGND
THDNGTKSKHLEFEFERHINNPDNYYYLTGQGDPLLCGNSSDAGVCPESYVCLKVGANPN
YGYTSYDSFGWAFLALFRLMTQDFWENLFQLTLRTAGKTYMIFFVVVIFLGSFYLINLIL
AVVAMAYAEQNEATLAEAKEKEEEYIHILEALKKREEEQAARKEPHSTVEGFEDDHRLCP
PCWYAFANIFLKWDCCGCWRHLKECLYAIVMDPFVDLGITICIILNTVFMAMEHYPMSAD
FEELLSVGNLVFTGIFTGEMVFKILAMDPYFYFQVGWNIFDSIIVTISLVELGLANVQGL
SVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN
YKDCVCRISEDCVLPRWHMNDFFHAFLIIFRVLCGEWIESMWDCMEVSGQTMCLIVFMMV
LVIGNLVVLNLFLALLLSSFSGDNLTTQDDEGENNLQIAINRINRAMSWTKTYILLYVYT
LTESNLNQHFAVSDDEEQRRVKDILALTSVSSDKLVSHHCGNDFFRVPIAEAESDSDDSD
YDEDKDSQCDESSVCSSVQKPEVQEEEMDENCVAKTPTDCWTKKCYSRCPFLDIDTSQGR
GKIWCNIRRTCFSIVENNYFESFIVFMILLSSGALAFEDIYLEKHQLIKSILEYADKVFT
YVFVMEMVLKWFAYGFKSYFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFSYCFNET
SQEIIDTKVVDNKTECIALIKANFTEVRWKNVKVNYDNVGIGYLSLLQVATFKGWTDIMY
AAVDSRDVESQPIYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGQDIF
MTEEQKKYYNAMKKLGSKKPQKPVPRPENPFQGLVFDLVTKQIFDVFIMVLICLNMVTMM
VETDEQSDKKEEVLYWINVVFILIFTTECTLKIIALRRHYFSIGWNIFDFVVVILSILGL
LLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFL
IMFIFSIFGMSNFAYVKKEALIDDMFNFETFGNSMICLFMITTSAGWDGLLSPIMNTPPD
CDPNVENPGTTVRGNCGSPAIGIAFFSTYIIMSFLVVVNMFIAIILENFNVATEESSDPL
CEDDFEMFYETWEKFDPDASQFIQYSKLSDFCDTLKEPLRIPQPNTIKLISMDLPLVPGD
RIHCMDILLALTAEVLGDSDEMDTLKATMEEKFMANNPSKVSYEPISSTLLRKEEEVAAT
VIQRAYRKYLLLRTVRLASFMYREKTEGRGKEKAPETTGLLCKQFSQLYGFNKETDEPLQ
SKANRLGQVELQSEVLLHAVPPLRSSEFLQERDQRETSV
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgagaactctactgccccctgttggttcagaggtcttcaggcgcttcacacagtcctca
cttaatgaaatccaacaaaagcaacaaatcagagaggaagaaaggaaaagaacaaatgca
caggtatcagaggaactcccagagccagccagtgacctggaagctgggaagccactccca
ttcatttatggtgaaccaccccatgaacttctcaatgtacctctagaggacatagatccc
ttctaccaatcacagaagacattcatcgtgttaagtaaaggaaacatcatctacagattt
aatgctgagtcatctctgtacctgcttagtccatttaacgctttgcgaatagttgccatc
aagattcttattcattctttattcagtttgttcatcatggcaacaattctgaccaactgt
gcgttcatgacactgagtgatcctccggcatggagcaaaactatggagtatgtgtttaca
ttcatctacacatttgaagccaccataaaaattctgtcaaggggcttttgtgtaggaaaa
ttcacctttctgaaagacccctggaactggctggacttcatggtcataagtatggcatat
ttaactgagttggtagatttaggaaacgtttctgtcttgaggactttcagggttcttcga
gctttgaagaccattacagtcattccaggtctgaagacaatcgtcggagctctcatccaa
tcagtgaggaagctggctgatgccatggtcctgactgtgttttgtctcagtgtctttgcc
ttgattggtctacagctcttcatgggaaacctacggcaaaaatgtgttctaatcccacaa
tggctgtatggtaacctcacttttgacatcaattctaccaatggttactatggtaatgat
acccatgacaatggtacaaaaagcaaacacttggagtttgagtttgaaaggcacatcaac
aacccagataactattactatctgactggtcaaggagatcctctgctgtgtggaaacagt
tctgatgctggggtctgcccagagagttacgtttgtctgaaagttggcgcaaatccaaac
tatggctacactagttacgactcctttggttgggcgttcttggctcttttccggctgatg
actcaggacttctgggaaaatcttttccagctgacactgcgaacagctgggaaaacctac
atgatcttctttgtagtggtcatctttcttggttcattttacctgattaacctgatcctg
gctgtggttgccatggcatatgctgagcagaatgaggccactttggctgaggccaaagaa
aaagaggaagaatacattcacattctggaagcactgaagaagagggaggaagagcaggca
gccaggaaagaaccacacagtactgtggaaggttttgaggatgaccacagactatgtcct
ccatgttggtatgcctttgcaaacatcttcctaaagtgggattgttgtggctgttggcga
catttgaaagagtgtctctatgccattgtcatggacccatttgtagatctaggcatcacc
atctgtatcatccttaatactgtcttcatggccatggagcattatccaatgtctgcagac
tttgaggagcttctgagtgttggaaatttggtcttcacaggtatcttcacaggtgagatg
gtttttaaaattctggcaatggacccatacttctacttccaggtgggttggaacattttt
gacagtatcatcgttaccataagtctggtggagctgggactggcgaatgttcagggcttg
tctgtgctgcgctccttcagattgatgcgcgtgtttaagcttgccaaatcatggccaacc
ctcaacatgttaattaagatcattggaaactctgtcggtgctttggggaacctgactctg
gtcttagcaatcatcgtcttcatctttgctgtggttgggatgcaactctttggaaagaac
tacaaagactgcgtttgtcgtatttcagaagactgtgtgctccctcgctggcacatgaat
gactttttccatgcattcctcatcatctttagagtcctgtgtggagagtggattgagtcc
atgtgggactgcatggaagtgtctggtcagactatgtgtctgattgtcttcatgatggtc
cttgtcattggaaacctagtggtcctgaacctgttcctggccttattgctgagctcattc
agtggtgataatcttactactcaagatgatgaaggagaaaataatttgcaaattgctata
aaccggatcaacagagctatgtcctggacaaagacttatattctgctatacgtctacact
ttaactgagagtaatcttaatcaacattttgctgtgtctgatgatgaagaacaaagaaga
gtaaaagacattttagcattgacctctgtgtcctctgacaagttggtgtcgcatcactgt
ggcaatgacttcttcagagtccccattgcagaggctgagtctgactctgatgattctgat
tatgatgaggacaaggactctcaatgtgatgagtcatcagtttgcagctctgtgcagaaa
cccgaagttcaggaggaggaaatggatgaaaactgtgttgcaaaaacacctacggactgc
tggactaaaaagtgttatagtcgttgtccattcttggacatagacacatcccagggcaga
ggaaagatctggtgcaacatcagaaggacctgcttttccattgtggaaaacaactatttt
gagtccttcatagtcttcatgatcttgctgagcagcggtgctctggcttttgaggatatc
tacctggagaagcatcaactcataaagtctatccttgagtatgcagacaaggtgttcact
tacgtattcgtgatggagatggttctcaagtggtttgcctatggattcaagtcttacttc
agcaatgcctggtgctggcttgatttcctcattgtagatgtatctttggtttctctgaca
gcgaacatcctgggttactctgagctgggtgccatcaagtctctcaggactctaagggct
ctgaggccccttagggccctatctcgctttgagggaatgagggtggtggtcaatgccttg
gttggagcagtaccctccatttttaatgttttattggtgtgtctaatcttttggctgatc
ttcagcatcatgggagtgaatctgtttgcgggaaagttttcttactgttttaatgagact
tctcaagaaataattgatacaaaagttgttgacaacaagacggaatgcattgctctgatc
aaggcaaactttaccgaggtccgctggaagaatgtgaaggtcaactatgacaatgttggg
attgggtacctgtctctgctgcaagtggccacatttaaaggctggacggacataatgtat
gcagcggtggattccagagatgtggaatcacagccaatatatgaagttaatctctacatg
tacctttactttgtcatcttcatcatctttggctccttctttacgttgaacctcttcatt
ggagttatcatcgacaacttcaatcaacaaaaagcaaagttaggaggacaagacattttt
atgacagaagaacaaaaaaaatattacaatgccatgaagaaactgggctctaagaaacct
cagaaaccagttccccgacctgagaatccatttcaaggtctggtgtttgacctggttacc
aaacaaatttttgatgttttcatcatggtgttgatctgcctcaacatggtgaccatgatg
gtagagacagatgagcagagtgacaagaaagaagaggtcctgtactggatcaatgtggtc
ttcatcctcatctttaccacggagtgtacactcaagataattgcactccgtcgacactat
ttctccattggctggaacatcttcgactttgtggttgtcatcctctctattctaggcctc
ctccttgcagacatcatagagaaatactttgtttctcccacactgtttcgagtgattcga
ttagctcgtattggccgggtgcttcgtctcatccgtggagccaaagggattcggacgctg
ctatttgccctcatgatgtcactccctgccctttttaacattggtctccttctcttcctc
atcatgttcatcttctctatctttggcatgtctaactttgcatatgtgaagaaggaggcc
ctgattgatgatatgtttaactttgaaacgtttgggaacagcatgatctgtttgtttatg
atcaccacctcagctggatgggatggtctgctgagtcccatcatgaacacccccccagat
tgtgaccccaacgtagaaaacccaggaacaacagttagagggaactgtggcagcccagct
attggcattgccttcttctccacttacatcatcatgtcattcctggtcgtggtcaacatg
ttcatagctatcatcttggaaaatttcaatgtggctacagaggagagcagtgatccactg
tgtgaagatgattttgagatgttttatgaaacttgggaaaagtttgaccctgatgcttca
cagtttatacagtacagtaaactttcagatttctgcgacacactaaaggaacctctgaga
attcctcagccaaataccatcaaattaattagcatggatctccctctcgtacctggagat
aggatccactgtatggacattttgcttgcactaacggcagaggttttgggtgattcagat
gagatggataccctcaaagccaccatggaggagaagtttatggccaacaatccttccaag
gtttcatatgaaccaatcagcagcaccctgctcaggaaagaagaagaagtggcagcaaca
gttatccaaagagcatataggaaatatctcctgctgcgaacagtcagactggcgtccttc
atgtaccgagagaagacagaaggccgggggaaggaaaaagcgcctgaaaccacgggactt
ctgtgtaaacaattcagtcagttgtatggatttaacaaagagactgatgagccactgcaa
agcaaagctaataggctgggccaggtggagcttcagagcgaggtgctcctccacgctgtt
cctccactcagatcctctgagttcctccaggaaagagaccaaagggagacttcagtctga
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