Terriglobus saanensis: AciPR4_0264
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Entry
AciPR4_0264 CDS
T01408
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
tsa
Terriglobus saanensis
Pathway
tsa03030
DNA replication
tsa03410
Base excision repair
tsa03420
Nucleotide excision repair
tsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AciPR4_0264
03410 Base excision repair
AciPR4_0264
03420 Nucleotide excision repair
AciPR4_0264
03430 Mismatch repair
AciPR4_0264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsa03032
]
AciPR4_0264
03400 DNA repair and recombination proteins [BR:
tsa03400
]
AciPR4_0264
Enzymes [BR:
tsa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AciPR4_0264
DNA replication proteins [BR:
tsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AciPR4_0264
DNA repair and recombination proteins [BR:
tsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AciPR4_0264
NER (nucleotide excision repair)
GGR (global genome repair) factors
AciPR4_0264
MMR (mismatch excision repair)
DNA ligase
AciPR4_0264
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AciPR4_0264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
5_3_exonuc
BRCT_2
RNA_ligase
HHH_3
zf-NADH-PPase
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ADV81102
UniProt:
E8V0N9
LinkDB
All DBs
Position
complement(310169..312253)
Genome browser
AA seq
694 aa
AA seq
DB search
MSPEQRASELRAEIEHHEHAYYVLDKPEISDAQYDALVNLLKALETEHPELVTPESPTQR
VGGKPREGFAKVAHSRPMLSLDNAYNEAELRAWAERVTTSLPASDAVEYTCEYKLDGLSL
ALHYENGQLVRGVTRGDGSVGEDVTSNVRTIRSVPLRIAAAKLKAAGLPGTFEVRGEVVM
PQSAFEELNRQREAAGQAAAANPRNAAAGTIRTIEPSIVAQRRLDFYAYFLLRDGDTLLK
SQQATLDALRATGFRVNAQARTVGTIDEVLGFIAQAEAERDGLGYEIDGVVIKVNATALQ
KRLGFTGKAPRWAIAYKFPARAGVTQLRGVIFQVGRTGKLTPVADLQPIFIGGTTVTRAT
LHNADEIERLGLKIGDHVSVERGGDVIPKITHVVEDKIHARGTEEIVFPTVCPRCGEPVV
REEGEVDWRCVNASCPARLEEELRHFASRGVMNIEGLGESLVAQLLGHTVAEAVDATAGV
GEGEESVAEAPTREALVHSVADIYGLTLEQLMGLERIGQKSAESLLAEIEKSKSAPLSRV
LLGLGIRHVGERTAQTLAEEFGSMDALISATEEDLTRVNDVGPKVAEAIREWFANEKNLL
LVQRLKDAGLTMTAEKRERGTQLAGMTFVLTGTLPTLTRDTAKEKIEAAGGKVSGSVSKK
TTYVVAGEDAGSKLEKARELGIAVLDEAGLLEML
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccgaacaaagagcctccgaactgcgcgccgagattgagcatcacgaacacgct
tactatgtcctggataagcctgagatctccgacgcgcagtacgacgcgctggtgaatctt
ttgaaggcgttggagaccgaacatccggagctggtgacgccggagtctccgacgcagcgt
gtcggcggaaagccgcgcgagggatttgcgaaggtcgctcactcgcgaccgatgctctcc
ctggacaatgcgtacaacgaagccgagctgcgagcgtgggcggagcgcgtgaccacttcc
cttcccgcttcggacgcggtggagtacacctgcgagtacaagctggatgggctgtcgctt
gccctgcactatgagaacggccagctggtgcgcggcgtgacgcggggcgatggcagcgtg
ggcgaagacgtcacgagcaacgtgcgcacgatccgctctgtgccgttgcgcatcgctgct
gcaaagttgaaggccgcgggattgccaggcacgttcgaggtgcgtggtgaagtggtcatg
ccgcagtctgcctttgaagaactcaaccggcagcgcgaggctgcgggacaggcggcggcg
gcgaatccgcgcaatgcggcggcgggaacgatacgaaccattgagccaagtatcgtggcg
caacggcgtctggacttctacgcgtactttctcctgcgcgatggcgacacgctgctgaaa
tcgcaacaggcgacactcgatgctctgcgcgctacgggatttcgcgtgaatgcgcaggcg
aggacggtaggaacaattgacgaagtgctgggctttatcgcgcaggcagaggccgagcgt
gacggcctgggatacgagatcgacggcgttgtgatcaaggtgaatgctacagcgctgcaa
aaacggctcgggttcacgggcaaggctccgcgatgggcgattgcctacaagttccctgcg
cgtgcgggtgtgacccagttgcgcggtgtgatcttccaagtaggaaggacgggcaagctg
acgcctgttgccgatctgcaaccgatctttatcggcggaacgacggtaacgcgcgcgacg
ctgcacaacgcggacgaaatcgagcggctgggtttgaagatcggcgatcacgtctccgtt
gaacgtggcggcgacgtgattccgaagatcacgcatgtcgtcgaagacaagatacacgca
cgcggaacagaggagattgtttttccgacggtgtgtccgcgatgcggcgagccggtggtg
cgtgaagaaggagaagtcgactggcgctgcgtgaatgccagttgccccgcgcggttggag
gaagagctgcggcactttgcttcgcgcggcgtgatgaacattgaaggcctgggcgaatcg
ctagtagcccagcttctgggacatacagttgccgaagcggttgacgccacagcgggagtg
ggggaaggcgaagagtccgtggccgaggcgccgacgcgcgaggcgctggtacattctgtc
gcggacatctatggactcacgctggagcagctgatggggcttgagcgcattgggcagaag
agcgccgagtctcttctggcggagattgaaaagtccaagtcggccccgctctcccgcgtg
ctgctgggcctgggcattcgtcatgtaggcgagcgcaccgcacagacgctggccgaagaa
ttcggcagcatggacgctctgatctccgcgacggaagaagacctgacccgtgtgaacgat
gttgggccgaaggtagctgaggcgatccgcgagtggtttgcgaacgagaaaaatcttctg
ctggtccagcgattgaaagacgccggtctgacgatgacggcggagaagcgcgagcgcgga
acgcagcttgccggcatgacgtttgtactgacaggcacgctacccacgttgacccgcgac
acggccaaggagaagattgaggcggcgggtggaaaggtctccggctctgtgagcaagaag
acgacctacgtggttgcgggcgaagatgcgggaagcaagctggagaaggcgcgtgagctt
ggcatagcggtgctggatgaggccgggcttctggagatgctgtag
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