Thiothrix subterranea: HMY34_05140
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Entry
HMY34_05140 CDS
T07831
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00300
Lysine biosynthesis
tsb00550
Peptidoglycan biosynthesis
tsb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMY34_05140
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMY34_05140
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsb01011
]
HMY34_05140
Enzymes [BR:
tsb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HMY34_05140
Peptidoglycan biosynthesis and degradation proteins [BR:
tsb01011
]
Precursor biosynthesis
Amino acid ligase
HMY34_05140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QQZ28190
LinkDB
All DBs
Position
complement(1079158..1080669)
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AA seq
503 aa
AA seq
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MKTVSLRELLHGIADAVPDIQVSGLTLDNRAIQPGMAFIALRGTRQHGLSYAATAVHAGA
TVVLYEPEAGLQPPPLSVESVPVPSLREHLGTLADRFNASPSAELFMVGVTGTDGKTSVS
HFVAEALNAIHPQQAAVLGTLGIGVPGALQPATHTTPDALTLHALLRHLQQGGFTTVAME
VSSHALDQGRVNGVRFNVAALTNLTRDHLDYHGTVEAYAEAKRKLFHWPDLQAVVLNLDD
AFGQRLAAELSGSAIQVIGYGVGKVADYPAGTLVASNPVFDHSGIRATVCTGQDEALLQA
PVLGQFNLHNLLAALGILLAKGETLSEALQGLQQVQVVPGRMERVTSTSLSDRGEITDTL
VVVDYAHTPGALQQVLKAVRVHTRGRLLCVFGCGGDRDRGKRPLMATIAESDADVVIVTD
DNPRSENPQQIFEDIMQGFHNKTGVTFEHDRTKAIRLAIGQAQPGDTVLIAGKGHETVQI
LAHGTVPFDDRTQAALALQECGA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgtttccttgcgtgaattgttacacggtattgcagatgctgtgccggatatt
caagtcagcggtttgacgctggacaaccgtgccattcaacccggcatggcattcattgcg
ttgcgcggcactcgtcaacacggtttgagttatgccgctaccgccgtacatgcgggtgcg
acggtcgtgctttacgagccagaagctggattacaaccgccacccttgtcggttgagtca
gtgccggtgccttccctgcgggagcatttaggcacgctcgccgaccgttttaatgccagc
cccagtgccgaattgttcatggtgggcgtgacgggtactgatggcaaaacctcggtgagc
cattttgttgccgaagctttgaatgctattcacccacagcaagccgccgtgcttggcaca
ttgggtattggtgtgccgggggcgttacagcctgccacgcataccacgccggacgcgctc
accttgcacgctttattgcggcatttgcagcagggtggatttacgacagtggcgatggaa
gtttcttcgcacgcgctggatcaggggcgagtcaatggggtgcgctttaacgtggcagca
ttgacgaatcttacccgcgaccatttggattaccatggcacggttgaagcgtatgccgag
gcgaagcgcaagttgtttcactggcctgatttgcaagcagtggtgctgaatctggatgat
gcctttgggcagcgtttggcggcggaattaagcggcagtgccattcaagtgattggctat
ggtgttggcaaggtggctgattatccggctggcactttggtggcaagcaatccggtattt
gatcacagcggtattcgggcaacggtatgcaccgggcaagatgaagcgctattgcaagcc
cctgtattggggcaatttaatttgcataatttgctggcggctttaggcatattgttggcg
aaaggcgaaacactgtcagaggcgttgcaagggttgcaacaggtgcaggtcgtgccgggg
cgcatggaacgtgtcacttcgacttcgctcagtgaccggggtgaaattaccgacacgctg
gtggtggtggattacgcgcatacgccgggtgcattgcaacaagtattgaaggcggtgcgg
gtgcatacccgtggacgcttgctgtgtgtgtttggttgcggtggcgaccgtgatcgcgga
aaacgtccgttaatggcaacaattgctgaatcagatgctgacgtggtgattgtaaccgac
gataatccgcgctctgaaaatccgcagcaaatatttgaggacattatgcaaggcttccac
aataaaacgggtgtgacctttgaacacgaccgtactaaagccattcgtctcgctattggg
caggcacaacccggcgataccgtgttgatcgcaggcaaggggcatgaaaccgtgcaaatt
ctggcacatggcacagtgccgtttgatgaccgcacccaagcagcgttggcgttgcaggag
tgtggcgcatga
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