Tritonibacter scottomollicae: R1T40_02180
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Entry
R1T40_02180 CDS
T09466
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco00300
Lysine biosynthesis
tsco00550
Peptidoglycan biosynthesis
tsco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R1T40_02180
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R1T40_02180
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsco01011
]
R1T40_02180
Enzymes [BR:
tsco01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
R1T40_02180
Peptidoglycan biosynthesis and degradation proteins [BR:
tsco01011
]
Precursor biosynthesis
Amino acid ligase
R1T40_02180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
WOI33579
LinkDB
All DBs
Position
311698..313182
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AA seq
494 aa
AA seq
DB search
MNDKPALKLSQLGLTARGGIDPVISGLAVDSRDVRQGFVFAALPGTRVHGAEFVPQVLEQ
GAVAILTDAYGAETAAAAIAAAGAALVVTEDPRQALSGAAALWFGGQPPVAVAVTGTNGK
TSVATFLRMIWTELGHQAVNLGTTGIEGAWTHPLAHTTPEPITLHRALAAAAEAGVTHVA
MEASSHGLDQRRLDGVQLLAGGFTNFTQDHLDYHETFEAYFAAKAGLFRRVMSEDDVAVI
NMSDPRGAEMRAIAAARGQEVISVGRGLGDLALMGMRVDATGQDIRFTWHDRPFAKRLNL
IGGFQAENILVAAGLAIASGEVPEQVFDTLPHLSTVRGRMELAATRDNGATVFVDYAHTP
DAVATAIKALRPHVLGRLVAIVGAGGDRDATKRPLMGQAAHDHADAVIVTDDNPRSEDPE
AIRAAVMGGAPNALNVGDRAEAILRGVDMLEPGDALLICGKGHESGQTIGNDVLPFDDVE
QASMAVAALDGRLA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaaaccagcgcttaagctcagccagttggggctgaccgcacgtggcggtatc
gatccggtgatttccgggctggcggtggacagccgtgatgtgcggcaaggctttgttttt
gcggccctgccgggcacccgtgtgcatggggccgaatttgtcccgcaggttctggagcag
ggcgcggttgcgattctgaccgatgcctatggtgcagagaccgcagcggcggcgattgcg
gccgccggggccgcgctggtggtcacagaagacccacggcaggccctgtcgggcgcagca
gcgctgtggttcggcggacaaccgccggtcgcggtggcggtgaccggcaccaacggcaag
acctcggtggccaccttcctgcgcatgatctggacggaactcggccatcaggcggtgaac
cttggcaccaccgggatcgagggggcatggacccatccgctcgcccataccacgccggag
ccgatcacgcttcaccgtgccctcgcggcggcggcagaggcgggtgtcacccatgtggcg
atggaggcgtcttcgcacgggttggatcagcgccgcctggacggcgtgcagcttctggcc
gggggctttaccaacttcacgcaggatcatctcgactatcacgaaaccttcgaggcctat
ttcgccgccaaggccggtttgtttcgccgtgtcatgtcggaagatgacgtggccgttatc
aacatgtctgacccgcgcggtgcggagatgcgggccattgcagctgcacgcggccaggag
gtgatctcggtcggtcgtgggctcggggatcttgcgctgatgggcatgcgggtggatgca
accgggcaggatatccgcttcacctggcatgaccgcccctttgccaagcggctcaacctg
atcggcggcttccaggcggagaacattctggttgcggcggggcttgccattgccagcggc
gaggtgccggagcaggtgtttgacacactgccgcatctcagcacagtgcggggccggatg
gagctggccgcgacgcgtgataatggcgcgacggtttttgtcgattacgcccatacgccc
gatgcggtggccaccgcgatcaaggccttgcgcccgcatgtgctgggacgtcttgtggcc
attgttggtgcgggcggcgaccgggacgcgaccaagcgccccctgatggggcaggcggcg
catgaccacgcggatgcggtgatcgtcaccgacgacaacccccgctcggaagatcccgaa
gcgatccgcgctgccgtcatgggcggagcgccaaatgccttgaacgtgggtgaccgggcc
gaggcgatcctgcgcggggtcgacatgctggagccgggtgacgcgctgctgatttgtggc
aagggccatgagagcggccagaccattggcaacgacgtgttgccctttgacgatgtggag
caggccagcatggccgtcgccgcgctggatgggaggctggcatga
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