Tritonibacter scottomollicae: R1T40_13535
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Entry
R1T40_13535 CDS
T09466
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R1T40_13535 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsco03400
]
R1T40_13535 (nth)
Enzymes [BR:
tsco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
R1T40_13535 (nth)
DNA repair and recombination proteins [BR:
tsco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R1T40_13535 (nth)
Prokaryotic type
R1T40_13535 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WOI31982
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All DBs
Position
2704799..2705443
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AA seq
214 aa
AA seq
DB search
MAKQLDYHTLREIFTRFQDADAAPVGELDHVNVYTLVVAVALSAQATDAGVNRATKELFR
IADTPQKMLDLGEEGVIAHIKTIGLYRNKAKNVIKLSRILVEQYGGEVPCSRAALESLPG
VGRKTANVVLNMWWRHPAQAVDTHIFRVGNRSGIAPGKTVDAVERAIEDNIPVDFQLHAH
HWLILHGRYHCKARKPMCPTCIIRDLCQYEDKTL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcaactcgattatcataccctccgcgagatcttcacgcggtttcaggatgcc
gatgcagcccccgtgggcgagctggatcacgtcaatgtctacacgcttgtcgtggccgtg
gcgctgtcggcgcaggccaccgatgccggtgtgaaccgcgccaccaaggagctgttcagg
atcgccgacacgccgcaaaagatgctggatctgggcgaagagggcgtgatcgcgcatatc
aagaccatcggcctctaccgcaacaaggccaagaacgtcatcaagctttcgcgcattctg
gtcgagcaatacggcggcgaggtgccctgttcccgcgccgcgctcgaaagcctgcccggc
gtcggccgcaagaccgcgaatgtggttttgaacatgtggtggcgccatccggcgcaggct
gtggacacccatatctttcgcgtcggcaatcgctccggcatcgcgccgggcaagaccgtg
gacgcggtggagcgtgccatcgaggacaacatccccgtcgatttccagctccacgcccat
cactggctgatcctgcacggccgctatcactgcaaggcgcgcaaacccatgtgccccacc
tgcatcatccgagacctctgtcagtacgaggacaaaactttatga
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