Tritonibacter scottomollicae: R1T40_19490
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Entry
R1T40_19490 CDS
T09466
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco01501
beta-Lactam resistance
tsco01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R1T40_19490
01503 Cationic antimicrobial peptide (CAMP) resistance
R1T40_19490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsco02000
]
R1T40_19490
01504 Antimicrobial resistance genes [BR:
tsco01504
]
R1T40_19490
Transporters [BR:
tsco02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
R1T40_19490
Antimicrobial resistance genes [BR:
tsco01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R1T40_19490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WOI33090
LinkDB
All DBs
Position
complement(3909560..3912676)
Genome browser
AA seq
1038 aa
AA seq
DB search
MGLFFIKRPVFAWVLALMTMLIGTWSALTLPVAQYPEIAPTTVRVSASYNGATAEAVENS
VTRVIEDAMTGLDGMIYMTARSSEGSASIQITFDESVEPIDAQNEVQTKVSQVEGQLPTA
VRTQGVTVSRSSSSILLVGAIVAENGQYSTVQLGNILSEQVEGPIQRTEGVGGVSIFGSG
YAMRIWLDPIALARFQLTPQDVVGAVQEQNTTVSVGSLGSQPTLTGQQFNATITAQSQMT
TVEEFEQILLKADESGGTVHLADVARVEIGQESYGGDSRFSGKNATGFGVNLATGANAVD
TAAAVRATLDRLAPSLPEGVEFEIAYDTSPFVELSIEQVYHTLIEAVVLVFLVLLLFLQS
WRATLIPLIAVPVVLLGTFAVLQIGGFSINTLTMFAMVLAIGLLVDDAIVVVENVERLME
DEGLSAREATQKSMGQITSALLGINVVLAAVFLPMAFFGGSTGVIYRQFSVTMVTAMTLS
LCVAIILSPPMSARLLKPKEGEPRFAPFRWFNALVNRGITGYGAGVKGTLRLPVLMPLAL
VAVLVAAYMVNNRLTTSFIPTEDQGVLLTVVTLPEGATTAQTTATVEKLEAFFLTDEADA
VESTFAALGFGFSGSGQNRAMVFVKLKSFDERDGQAQLAAAQVAQRANIAFSQLRDGQIF
VLQPPAIRGLGNSGGFEMYLVDQSGAGSDALQAAAEQLVANAEQSDRVVNLSANGTEKDS
ALKITIDRAKAESFGLTLSEVNGMLSVIFAGSEVNDFELGAALRPVIVQGDAPYRMQTED
VFDWYARNAAGEMVPFSAFMSTSWEPVAPTLERYGATSALQISGSPGSGYSSGTAMAEME
ALVADLDGGYAAAWTGLSYQERQSGDQAPILYAISALVVFLALAALYESWSIPLAVMLAV
PVGILGALFAAWIFGQSNDVYFKVGMLTTIGLAARNAILIVEFAEDLRRTGMTIADAAIE
AARLRLRPILMTALTFILGVLPLALATGAGAASQNAIGIGVIGGMVASTFLGIFMVPAFY
VLIMRVTRKLTGVDIGAV
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcttctttatcaagcgcccagtctttgcatgggtgctcgccctcatgaccatg
ctcatcgggacatggtccgcgctgaccctgcctgtggcgcagtatccggaaatcgccccc
actacggttcgggtttcagccagctacaacggtgccacggccgaggcggtggagaactcc
gtcacgcgggtcatcgaggatgccatgaccggcctggacggcatgatctatatgaccgcg
cgctcctccgaggggtcggcgtccatccagattacctttgatgagagcgtcgagccgatc
gacgcgcagaacgaggtccagaccaaggtgtcgcaagtcgagggccagctgccgaccgct
gtgcgtactcagggcgtgaccgtttcgcgatcctcgtcctccatcttgctggtcggcgcc
atcgtggccgagaatggacaatactccaccgtccagctcggcaacatcctatctgaacag
gtcgaaggaccgatccaacgcactgagggggtcggcggcgtcagtatctttggttccggc
tatgccatgcggatctggctcgaccccattgccctggcccggttccagctgacgccacag
gacgtggtcggcgcagttcaagaacagaacaccaccgtttcggtcggctcactcggcagc
caaccaactctcacgggtcagcagttcaacgccacgatcacggcacagagccagatgacc
accgtcgaggaatttgagcagatcctgctcaaggccgatgaaagcggcggaactgtgcat
ctggcagatgtggcgcgcgtggagatcggccaggaaagctatggcggcgactcgcgtttt
tccggcaagaacgcgactgggttcggcgtgaacctcgccacaggtgcaaacgcagtggac
acggccgccgcggtgcgcgcgacactggatcgccttgccccctccttgccagagggcgtc
gagttcgaaatcgcatatgacacttcgccctttgtcgagttgtcgatcgaacaggtctac
cacacgctgatagaagcggtcgttctggtgttcttggtgctgttgctgttcctgcaaagc
tggcgggcgacgctgatcccgctgatcgccgtgccggtggttttgctcgggacatttgcc
gtcctgcagatcggtggcttctccatcaataccctgaccatgttcgccatggtgctcgcg
atcggactgctggttgatgatgccattgtggtggtggaaaacgtcgaacgcctgatggag
gacgaaggcctgtccgcacgtgaagcgacccagaagagcatggggcaaatcacctctgca
ctgttggggatcaacgtggtactcgcggcggtcttcttgccgatggcgtttttcggcggg
tccaccggggtgatctaccgccagttctctgtcaccatggtcacagcgatgacattgtcc
ctctgcgttgcgatcatcctgtcgccaccaatgtctgcccgccttctgaagccaaaggaa
ggcgaacctcgtttcgcccccttccggtggttcaatgcgctcgtcaatcgcggcatcacc
gggtacggcgctggggtcaaaggcacgctgcggctgcccgtattgatgccgctcgccctc
gttgcggtgttggtcgcggcctatatggtgaacaatcgcctcaccacatccttcatcccg
accgaggatcagggcgtgcttctgaccgtcgtcacgcttcccgagggggcgacaaccgcg
cagacgaccgcaaccgtggaaaaactggaggcgttcttcctgacggacgaagccgatgcg
gtggaaagcacgtttgccgcattggggttcggattttctggcagtggacagaaccgcgcc
atggtttttgtaaaactcaaaagctttgacgagcgtgacggacaggcccaacttgccgcc
gcacaggtggcgcaacgggccaatattgccttcagtcagctgcgggacgggcagatcttc
gttctgcaacccccggccattcgagggctcggcaacagtggtggctttgagatgtacctg
gtcgaccagtccggcgccggctccgacgcccttcaggctgcagcggaacaattggtcgca
aatgccgagcagagcgatcgcgtggtcaacctcagcgccaatggcaccgagaaggacagc
gccctgaaaatcacgattgatcgtgccaaggccgagagtttcggcctgaccttgtccgag
gtaaacggcatgttgtccgtgatcttcgcaggatccgaggtcaatgatttcgagcttggc
gctgcattgcgcccggtcatcgtgcagggcgatgcaccctatcgcatgcagaccgaagac
gtctttgactggtatgcgcgcaacgcagccggagaaatggtgccattctcggccttcatg
tccacctcctgggaacccgtcgcccccacgctggaacgctacggcgcaacctcagccctg
cagatttccggctcgccggggagcggctacagttctggcacggcaatggcggagatggag
gcattggtggccgacctggacggaggatacgcggcggcctggaccggcctcagctatcaa
gaacgccaatccggcgatcaggcgccgatcctctacgcaatctccgcgctggtcgtcttt
ctcgcactggccgctctctacgagagctggtcgatcccgctggcggtgatgctggcggtg
ccggtgggcattctcggagcgctgttcgcagcctggatctttggtcagtcgaatgacgtc
tacttcaaggtgggtatgctgaccacgatcggactcgcggcacgaaacgccatcctgatc
gtggaatttgcagaggatctgcggcgcaccggcatgaccatcgccgatgccgcaatcgaa
gcggcccgtctacggttgcgcccgatcctgatgaccgctttgacgttcatactcggggtg
ctgcccctcgccctcgcaaccggcgcaggcgcagcatcgcaaaacgccatcggtatcggg
gtaatcggcgggatggtggcttccaccttccttgggattttcatggttcctgcattctac
gtcctgatcatgcgggttacccgcaagctgacgggtgtcgatatcggcgctgtctga
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