Trachymyrmex septentrionalis: 108748572
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Entry
108748572 CDS
T11226
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108748572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsep03041
]
108748572
Spliceosome [BR:
tsep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108748572
Complex C
U5 SnRNP specific factors
108748572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
Ras
MMR_HSR1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108748572
NCBI-ProteinID:
XP_018342305
UniProt:
A0A151JX87
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASESEDENEYGNVGDDTEDRERSDEEMEEDKDESREQVEQGSS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKAKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVQQTHPYLHNITDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNIFDTSGHVNFSDEATAAIRLSDGAILIVDAAE
GVMLNTERLLKHAIQEKLALTVCINKIDRLMMELKLPPLDAYYKLRHIIEEINGLIALYS
SDTENPGFVSPAVGNVCFASSEYNVCFTLKSFAALYARNYPGLNANEFAKRLWGDIYFNP
KTRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMN
IRPLLRLVCTRFLGDMCGLVDMCVTHVPSPQAHAPTKVQHVYTGPIDSPLAQDMINCDPD
GRLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLW
ISEARYSIELSRVPAGNWVLIEGIDRPIVKTSTITDLNNSEELHIFRPLKFNTQSVIKIA
VEPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEI
DIKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVRITWNK
KRLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKTLLNSARDAIIQGFQ
WGTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPY
LFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYIIKAFIPAIDSFGFETDLRTHT
QGQAFCQSVFHHWQIVPGDPLDKSINMRPLEPQPATHLAREFMLKTRRRKGLSEDVSINK
FFDDPMLLELARQDVLLNYPL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggatttatatgatgagtttggaaattatattggtcctgatctggcatcagaa
agtgaagatgaaaatgagtatggcaatgttggtgatgacaccgaggatagagaacgatcg
gatgaagaaatggaagaagataaggatgagtcacgagaacaagtggaacaaggatcttct
atggcagtagtattgcatgaagataaacgatattatcccagtgcattagaggtgtatgga
cctgaggtagaaacgcttgtacaagaggaagatgcccaaccactagataaaccactaata
gcacctactagaaaagcaaaatttcaaataaaacaacaacagctgcctgaaaccacatat
agcattgaatttttagcagatatgatggatgcaccacatcttattagaaatgtagttttg
ctgggacatcttcatcatggcaaaactactttggttgattgtttggtacaacaaacgcat
ccttatttacataatataaccgatgagaaaccactgagatatacggatacattatttacc
gagcaacaaagaggtgtctccacaaaagctactcctgtcactctcttgctacaagatgtt
aaatctaaatcatatcttttaaatatatttgatacatccggccatgtgaatttttctgat
gaagcaacagctgcaatcagattatctgatggtgcaatattaatcgttgacgctgcagag
ggagtgatgctgaacactgaacgcctgctgaagcatgcaattcaagaaaagcttgctttg
acagtttgtataaacaagatagatcgtttgatgatggaattaaaactaccacccttggat
gcttattacaaactgcggcatattattgaagagatcaacggattaatagcactatactct
tcggatactgagaatcctggctttgtgtcacctgctgtaggaaatgtttgttttgctagt
tctgaatataatgtatgctttactttgaaatcgtttgctgcactctatgctaggaactat
cctggactcaatgccaacgaatttgccaaacggctctggggtgatatttattttaatcct
aagacacggaagtttaccaagaaaccacctcataatactgcacagcgaagtttcattgag
tttatcctggaacctctgtataagatattcgcgcaagtcgtcggtgatgtagacacaaca
ttacctgatgttctggacgaactcggtatacgattaacatccgaggaaatgaagatgaat
attcgaccgttattgagacttgtctgtacacgattcttaggcgatatgtgcggattagtg
gacatgtgtgtcactcatgtacctagcccgcaagcacatgcacccactaaagtacaacac
gtttatactggtccgatagattcgcctctcgcgcaagatatgattaattgtgatcctgac
gggagattgatgatccatagtacaaaaatgtatccaactgaagattgcaccttatttgta
gttcttggtagagtaatgtctggtacattagaagcaggacaacgtgttcgcgtattaggt
gaagcgtattcacgcacagacgaagaagattcgcgtgttctgacagtaggcagattgtgg
attagtgaggcgcgttactcaattgagttaagtcgcgtgcctgcaggtaattgggttctc
atagagggaattgatcggccgatcgtaaaaactagcaccatcacggatctcaacaactct
gaagagttgcacatctttcggccgctcaagtttaacacacaaagcgttatcaaaattgcc
gtcgaaccggtgaatccatccgagttaccaaagatgttggatggtttgcgaaaagtaaat
aagagttatccgctgctgggcacacgagtggaggaaagtggcgagcacgttgtgctagga
actggcgaactttatctcgactgcgcaatgcatgatctacgtcgtatgtattctgagatc
gatataaaggtggccgatccggtagttgccttcgcagaaactgtcgtagaaaccagttcc
ctcaaatgctttgccgaaacaccaaataaacgaaataaattgacgatgatagcggaaccg
cttgaaaggggtcttgctgaagacatagaagccgaacatgtccgtattacatggaacaaa
aagagactaggagaatttttccaaacgaaatatgattgggatttattagcagcgcgaagt
atatgggcatttggtcctgactctacaggacctaacattttggtggacgacacattgcct
tctgaagtagataaaacattattgaacagtgcccgcgatgctatcatccaaggcttccaa
tggggaactcgtgaaggtccgttatgtgaagaacctatccggaacgtgaaattcaaaatc
ctcgatgcagtcattgcgcaagagccattgcacagaggaggtggtcaaatcattcctact
gctcgacgtgtcgcatattcagcttttctcatggcgactccacgactgatggaaccatac
ttgtttgtcgaggtacaagcacccgcggattgcgtgtctgctgtttatactgttctggcg
aaacggcgaggtcatgtaacgcaagatgccccagtcccaggcagtcctttgtatataatc
aaagccttcataccagcgatcgacagttttggcttcgaaacagatttacgaacgcacact
caaggccaagcgttttgccaatctgtttttcatcattggcagattgtacctggagatcct
ctggataagagcattaacatgagaccattagaaccacaaccagccacccatttggccaga
gaatttatgttgaaaacgcgaagacgcaagggactatccgaggacgtatccatcaacaag
ttcttcgatgatcctatgttgctcgagctagctcgacaggatgtattgctaaattatcct
ctctaa
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