Trachymyrmex septentrionalis: 108752049
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Entry
108752049 CDS
T11226
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108752049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108752049
03032 DNA replication proteins [BR:
tsep03032
]
108752049
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108752049
mRNA cycle factors
Common to processing body (P body) and stress granule
108752049
DNA replication proteins [BR:
tsep03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
108752049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
108752049
NCBI-ProteinID:
XP_018348147
LinkDB
All DBs
Position
Unknown
AA seq
1732 aa
AA seq
DB search
MADRNKGRRNKEEISQELKTAKLEKERLVEMRGGGNRAPQALYRPGSGPLRKSDRSNSTA
DEYDNGTENGSQEKSRLTSVQYHPRQSQPNRANQTQNSPPLSQIDNVAKKLDNTHINYRN
SNNSESVQSLGNNSGGAAGRNDPKKKNRKPEQLLYVPKKVKEAQRAEQDGINRSPSHTTW
EREREESNDRDSHSNRNHKSDRNRASSRTMRDNKSEGRGRNDISKRYSGNRRHRHANENE
ERYWRTESPVSARNCANQKDNSREVRQGSEPLSLTNQNDFNRTRDTRSVEPVGRLDKFQG
KPPSGRRNPKDTLSKNIKLDSLPPRFQKKFFLDNGYSLPSNTPGTSAEDSWNGSSITFQQ
GLSNYNYPSSMQHSQTLQNLPPSGSLQSLQSNWTNTVPTRSRGRGRLRPEECDGTAGSIL
RPVTPDQYSAPSSRSHTPSQEYINNIRSCDRRGSNSTMYTSMESLSRDSVMMPPPLSASP
ATSQSNSNRGYRSPENHRRSAISPIDDRTSNMQRTITSNAYEYNSNIDKQNNQQNTNLSS
MKNESCNKSSYTTSETFDWSEEVELNEKLEQEHLSRSSSVLSIRESTSVLRSQAVGESHR
RRKKKKRDKHRDVDRGSSRDKGRGNSRERQKNQQNRENDNYNNNQKNNNSNSSSSNRRYD
HRRHNIIQRSRESSKDRNYGNSYRNFDELHRRRTDRYLDEDWRTGRKISTCESDDGRQTP
KVSSHTAPLSSVNSNSTVHRSSPTGYSNAPGVLILPNETSQSSPNQTATTSQQGTGQQQQ
RTLFDPNNPHKPIVITSPGSRAAVQRDSDMQVSSVPVFQSNVGITSPHYSFHGAQLDGMP
PPYMNDQIGNVRPPWYEPFSASFHSAKNHCLLLDIERADLELQWIISSGGFTSRLDRVSY
IRHFLQQSLKILLETDIKFCQAENVEQHFWKILFYNLIEMLRKVMPKENSEGRERYKQIM
LNIIDEGTTYLESLLATLETTYQFKLDAFLASSSLPKGLGLLGLALVSAQKIFLFLGDLA
RYKEQANETSNYGKSRQWYLKAQQINPKNGRPYNQLALLAHYARRKLDAVYYYMRSLMAS
NPFHSARESLIGLFDENRKKYLHYYESIERKRKEERESKERARMKEKEGANIIGGGLRRE
TWIHPGDGRRVRRTTSATNEARLSHASDLEELSQLTSVEVNKRFVTSYLHVHGKLITKIG
METFQEAGVQMLKEFRALLQHSPLPLPGTRLLQLLALNMFAIETTQLKDSQMEQGYRSEV
QERALVVSLQMFSLILERGVYLLKAQLDSEQEPRLVVGEDLQVLLPAIKIWCDWMLCHST
VWNPPPSCTDYRVGPPGDAWSRLATMVNLLEKLNYTRTTLIQGKDTEDREEDLELVKLPE
DITLAGFTPLMLNPQDPCYVEKTEDMEVAQMCLRISKILFFGQVFLCGLETPVLKLQKSE
TGVSEYVSVVEASSTSSPSSPPTQSDSELMVESYSEGEEDSITMLRRLPSCGNVTDDTTA
PVATVEIRSLIERKEELERRQRKQDRHRQRVQAILQKSSVSVEIEVRPRQLVPDTNCFID
YLQQLQIIARATSGAQPIYTLMVPLVVLNELEGLARGADARDCPPASRATLNPEHVVRVA
ESAKAALAFARSRNPAIRCLTTRGTVLTSSTFTVEEDVDKDGLTRNDDRILTTCLSLCRS
IKDQANAEEGQPRRLRREVVLLTEDRNLRVKALARDVPVREVPDFMQWAGLG
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgcaacaaaggacgcagaaacaaggaagaaatttcacaagaattaaagact
gccaaattagagaaggaaagattggtagagatgcgtggtggaggaaatagagcacctcag
gccttatacagaccagggagtggccctttacgtaagtcggacagatctaacagcactgcc
gacgaatatgataatggtactgaaaatggttcacaagaaaaatctagattgacctccgtc
cagtatcatccgagacagtcacaacctaatagagcaaatcagacacaaaatagtccacct
ctatcacaaatcgataatgtagctaaaaaattagacaatacccatattaactatagaaat
agcaacaatagtgaatcagtacaaagtcttggtaacaattctggcggagcagcaggtaga
aacgatccaaaaaagaaaaataggaaacctgaacaattgctatatgtaccaaaaaaagtg
aaagaagcacaacgggctgaacaggatggaattaacagatctcccagccatactacatgg
gaacgagagagagaagagagtaacgatcgcgattcacattcaaatcgtaatcacaaaagc
gatcgcaatcgtgcgagtagtcgcaccatgcgagacaataaaagtgaaggcagaggtaga
aatgacattagtaaacgatattcgggtaatcgtcgacatcgtcatgcaaatgagaatgaa
gaacgttattggcgaaccgaatcgccggtgtctgctagaaattgtgctaatcaaaaggat
aattcacgtgaagttagacagggctcggaacctttatctttgaccaaccagaatgatttt
aatcgtacgcgagacactcgcagtgtagagcctgttggacgtttggataagtttcaagga
aaaccaccgtcaggtcgacgcaatccaaaagataccttgtcgaaaaatatcaaattagat
tccttgccaccacgatttcaaaagaaatttttccttgataatggatattcattacctagc
aacactccaggtacgtccgcagaggactcctggaatggtagcagcattacatttcagcag
ggtttatccaattataattatccatcatctatgcagcattcacaaacattgcaaaatcta
ccaccatctgggtcgttacaatccctgcaatctaattggactaacaccgtcccaacgaga
agcagaggtagaggtagacttagacctgaggaatgtgatggtacagccggtagtattttg
aggcctgttacacctgaccaatattcggctccaagttccagatctcatactcctagccaa
gaatacataaacaatatacggtcttgtgatcgccgtggtagcaatagcactatgtataca
agcatggaaagcttaagtcgcgatagcgtgatgatgcctccgcctttatctgcatcgcct
gcaacttcgcaatcaaattcgaacagaggttacagatcacctgagaatcatcgcagaagc
gcaatatcaccaatagacgatcgcactagtaacatgcaaagaacaatcaccagtaatgcc
tacgaatacaattcgaatatagacaagcagaataatcaacaaaacacgaatcttagttcc
atgaaaaacgagtcgtgtaacaaatcatcttataccacatctgagacatttgattggagt
gaagaagttgaattaaatgaaaagttagaacaggaacatttaagtcgtagttcatccgta
ttaagcatacgggaaagcacaagtgtgctgcgaagtcaggctgtaggcgagagtcatagg
cgacgtaaaaaaaaaaaacgtgataaacatcgtgatgtcgatcgtggcagtagccgagat
aaaggacgaggtaacagccgcgaacgtcaaaaaaatcaacagaacagagagaatgataac
tataacaataatcaaaagaataataacagtaatagtagtagtagtaataggcgatacgat
cacaggagacataatatcattcaacgtagccgagaatcgagtaaagacagaaattatggt
aacagctatagaaactttgacgagcttcacaggcgcagaactgatagatacttagatgaa
gattggagaacaggtagaaagatatcgacttgcgagtcggatgacggaagacaaactcct
aaagtctcttctcacactgctccactttcgagtgtgaattcaaactcgacagtacacaga
tcgtctccgacgggatatagtaatgccccgggtgtcttgatcttgcctaatgagactagt
caatcgtctcctaatcagacagctacaacttctcaacaaggaaccgggcaacaacaacag
agaacgctgtttgaccctaataatccacataaacctattgttattacttcacccggaagt
agagcagctgttcaaagggatagtgacatgcaagtctcaagcgttccagtatttcaatct
aatgtaggtatcacatcaccacattactcttttcatggtgcccaattggacggtatgcca
ccaccatatatgaacgatcaaatcggaaatgtaagacctccgtggtatgaaccgttttct
gctagttttcattcagcaaagaatcactgtcttttattggacatagaacgtgccgatttg
gaattacaatggataataagttccggtggctttacctcgcgtttggatagagtctcgtac
atacggcactttcttcaacagagcttgaagatcttgcttgagactgatatcaaattctgt
caagcggagaacgttgagcaacacttttggaagatattgttttataatctgattgagatg
ctgcgaaaagtgatgcctaaagagaactcggaaggacgagaacgttacaagcagataatg
ttaaatatcattgatgagggtactacttatctggaaagtttactggctactctcgagact
acgtatcagttcaaattagacgcatttcttgcatcatcgagtttacctaagggtcttgga
ctcttgggtctggccttagttagtgctcaaaagatatttttattcttgggagacttggcg
aggtacaaggagcaagcaaacgaaacgagcaattatggaaaatctaggcagtggtacttg
aaagcacagcaaatcaatcctaaaaatggcagaccttataatcaacttgccttactagca
cattatgctagacgaaaattagatgccgtatattattacatgcgatctcttatggcgtcc
aatcctttccattctgccagagaaagtttgatcgggctcttcgatgaaaatagaaaaaag
tatctacattattacgagtctatcgaacgtaaacggaaggaggaaagggaatcgaaggag
cgggcgaggatgaaggaaaaggaaggtgcgaacattatcggcggtggactgaggagagag
acatggattcatccaggtgacggtaggcgggtacgacgtacaacgagcgcgaccaacgaa
gcgagattgtcccacgcaagcgacttggaggagttatcgcaattaacgagtgtcgaggtg
aacaagcggtttgtcacttcataccttcatgttcacggaaagctcatcaccaaaattgga
atggaaacttttcaagaagctggcgttcaaatgctgaaggaattcagagctttgttgcag
cactcgccactaccgcttcctggtactcgtttacttcagctcttagcgctgaacatgttc
gcaattgagactacgcagctgaaggattctcaaatggaacaaggctatagatcagaagtc
caagaacgagcactcgtcgtatcgctgcagatgttcagcttgatcttggagcgtggtgtc
tacctactgaaagctcagctagatagcgagcaggaaccgaggctggtggtcggagaggat
ctccaagtgcttctaccggctattaagatctggtgcgattggatgctttgtcatagcact
gtttggaatcctccgccgtcttgcacggattacagagtcggaccaccaggagatgcgtgg
agcagactagcgacgatggtgaatcttttagagaaattaaattacaccaggacgactctg
attcaaggcaaggatacggaggatcgtgaggaagacttggaactcgtaaaactaccggaa
gatatcacgttggctggattcacccctctcatgttgaatcctcaagatccttgctatgtg
gagaaaacggaagatatggaagtggctcagatgtgcctcaggataagcaagattctcttc
ttcggtcaagtgttcttgtgcggtttggagacaccggtgctgaaattgcagaaaagcgag
accggcgtcagcgaatatgtttccgtggtcgaggcttcgagcacgagttcgccgagttcg
ccgccgacacagagcgactcagaactcatggtagaaagttacagcgagggagaggaagat
tcgattactatgttgagaagattaccctcgtgtggcaatgtgaccgacgatacgacggct
cccgtggcgactgtcgagataaggtcgctgatcgagaggaaggaggaactggagaggcgg
cagcggaaacaagatcggcatcgacagcgagtacaggctattttacaaaagtcctcggtg
tcggtagaaatcgaggtgagaccgagacagctggtgccagacactaattgcttcatcgac
tacctgcagcaattgcagatcatcgcgagagccacttccggcgcgcagccaatctacact
ctcatggtgccgctcgttgtactaaatgaactcgaaggtctagctcgaggcgccgatgcg
agagattgtcctccagcgtcgagagcgactctgaatcctgagcatgtggtgcgagttgcc
gagagcgccaaggcggcattggccttcgcgagaagtcgaaatccagcgatccggtgctta
accacgaggggcaccgttctcacatccagcacttttacggtggaggaagatgtcgacaag
gatggattgacacggaatgacgatagaatattgactacgtgcctcagtctttgcagaagc
atcaaggatcaagcaaacgcagaggagggacagccgagacgtttgagacgggaggtggtt
ctactcacggaggaccggaacctgagggtgaaggctctggccagggacgtgcccgtgagg
gaagttcccgatttcatgcaatgggctggactcggctga
DBGET
integrated database retrieval system
