KEGG   Trachymyrmex septentrionalis: 108752869
Entry
108752869         CDS       T11226                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RAD18-like
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
tsep  Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:tsep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsep04121]
    108752869
   03400 DNA repair and recombination proteins [BR:tsep03400]
    108752869
Enzymes [BR:tsep01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108752869
Ubiquitin system [BR:tsep04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108752869
DNA repair and recombination proteins [BR:tsep03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    108752869
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 SAP zf-RING_6 zf-RING_5 zf-RING_UBOX RING_XB3-XBAT31 zf-rbx1 zf-C3HC4_4 zf-WRNIP1_ubi DUF1178 Zn_ribbon_ACC
Other DBs
NCBI-GeneID: 108752869
NCBI-ProteinID: XP_018349537
LinkDB
Position
Unknown
AA seq 682 aa
MWSTEYVELKRIDALLQCGICYDYMDTSVITSCSHSYCSLCIRKYLHHKTQCPTCFEEIF
EKDLRKNKLVDEIIIQYLNFKEKHDKKVYHEKLITVKNENSGVECSTNNFEYKKEQDISD
VSHHHLDNSMLTVGNTTPRRQKDNQQDISTPSTSADPKIPSMFTPKSRKSFQKEENRQLV
TCPVCKVEVPQNNINRHLDDCLRRENTKMEPKNSESKRKPLPKLVYSLMKDNVIRKRLKE
LGLSSQGDKKALTNRLQRYTVLYNAECDKTCPRPIPELIKQCEEEEDLEKKVQKSNSIFS
NVTRNTEDNIVEQKRKQYLTTNKESFDKLIVKIKHDNDPQKISVRRSILNEENSDVLLNN
CVAENSSTLKNDQTSDFLLLNSTNCIEDSNSNTSYPLQSSNPMDFLTVELDTLSNDSTDQ
CAFNHDISNRSNTISSDLFNRTIKMENKIEELSSENILGEEIISNNHSRQCDVLKNEIGI
DTAKSISELVNMETKNEEQTKLVNRNRSGTKKYTPNKHVAHSEFRDRWQKELRNENIDSM
VEDDNIDVKDNYEKSNLEQLNEAVEEYAIGMKSEKENMKALDKDLTTWTPRKREREMAFA
LSDEEKIADRTMNVKKSLRFGLSEAKGFNNENFGETAQDEEKSQNEKEESQRLSQEQVTI
SGHSSGILSGWHLRIFLDGSLL
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgtggtcgacagaatacgttgagttaaagcgtattgatgcgttattgcaatgtgggata
tgctacgattacatggacactagtgtaataacttcatgctcccatagttattgttcgttg
tgtattagaaagtatctgcatcacaagactcaatgtccaacttgttttgaggaaatattc
gagaaggatttaaggaagaacaaactcgtggatgagattattattcaatatttaaatttt
aaagaaaaacatgacaagaaagtttatcatgaaaaattaattactgtaaagaatgaaaat
tctggagttgagtgttcgacaaataattttgagtataagaaggaacaagacatttccgac
gtatcacatcatcatttagataattcaatgctcacagttggtaataccacgcctcgtaga
caaaaggataatcaacaagatatatctactcctagcactagtgcagatcctaagattcct
tcaatgtttactccgaagagtagaaagagttttcagaaagaagaaaatcgtcagttagtt
acctgtccagtgtgcaaggtggaagtgcctcaaaataatataaatagacatttagatgat
tgtttaaggagggaaaatacaaagatggaacctaaaaatagcgaatcgaaacgtaaacct
ttgccaaagttagtgtatagtttaatgaaagataatgttatacgaaaaagactgaaagaa
ttaggtttatcatcccaaggagataaaaaagcattaacgaatagactacagagatataca
gttctttataatgcagaatgtgataagacatgtccaagacctataccagaattaattaag
caatgtgaagaagaagaggatttggagaagaaagtacaaaaatcaaatagtattttttcg
aatgtcactagaaacactgaagataatattgtagaacaaaagagaaagcagtatttgact
acaaacaaagaaagttttgacaaattaattgtaaaaataaaacatgacaatgatccacaa
aaaatttctgttaggcgcagcatattaaacgaagaaaattccgatgttttacttaataat
tgtgttgcagaaaatagttcaactttaaaaaatgatcaaacaagtgattttctgttgcta
aattctactaattgtatcgaagattcgaattcaaacacgtcttatcccttgcaatctagc
aatcctatggattttctaactgttgaactagataccttatctaacgattccactgatcaa
tgtgctttcaatcatgatatctcaaaccgttcaaatacaatcagctcggatttatttaat
cgtactataaaaatggaaaataaaatcgaggaattgtcttccgaaaatattttaggtgaa
gaaataatttctaataatcattcaagacaatgtgatgttttgaagaatgaaataggtatt
gatactgcaaaatcaatttctgaacttgttaatatggaaacaaagaatgaagaacaaacg
aaattagttaatagaaatagaagtggcacaaaaaaatatacgccaaacaaacatgttgca
cattccgaatttagagatagatggcagaaagaattacgtaacgaaaatatagattcaatg
gtagaagacgataatattgatgttaaggataattatgaaaaatcaaatctcgagcaatta
aatgaagcggtggaagagtatgctatcgggatgaaatctgaaaaagaaaacatgaaagca
ttggacaaagatctaacaacttggactcctagaaaacgagaacgtgaaatggcattcgca
ttaagcgatgaggaaaaaattgcagatagaacaatgaatgttaaaaagtctctccggttt
ggacttagtgaggctaaaggatttaataacgaaaatttcggcgaaactgcgcaggatgaa
gaaaaatcacaaaatgaaaaggaagagtcacagagactctcgcaagaacaagtgactatc
tccggacattcgtcagggatattatctggatggcatctgcgaatatttctcgacggcagt
cttttgtaa

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