Thomasclavelia spiroformis: NQ543_09460
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Entry
NQ543_09460 CDS
T09467
Symbol
vanR
Name
(GenBank) VanR-ABDEGLN family response regulator transcription factor
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
tsf
Thomasclavelia spiroformis
Pathway
tsf01502
Vancomycin resistance
tsf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NQ543_09460 (vanR)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NQ543_09460 (vanR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tsf02022
]
NQ543_09460 (vanR)
01504 Antimicrobial resistance genes [BR:
tsf01504
]
NQ543_09460 (vanR)
Two-component system [BR:
tsf02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
NQ543_09460 (vanR)
Antimicrobial resistance genes [BR:
tsf01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
NQ543_09460 (vanR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
DUF1322
HAD_2
Motif
Other DBs
NCBI-ProteinID:
UWO89185
LinkDB
All DBs
Position
1982000..1982689
Genome browser
AA seq
229 aa
AA seq
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MAYNILVVDDEQSIADLIELYLQNENYHIFKYYCGKDALESLQKNHYDLAILDVMMPDLD
GFSLLKKIRKHYYFPVIMLTAKSNDLDKINGLTLGADDYLTKPFNPLELAARVKTQLRRY
LRYNQNPSTNQHIYDFNGLVINNHTHKCTLYDQPLNLTPIEFSILWYLCSKRGNVVTSEE
LFEAVWQEKYLDNNNTVMAHVARLREKMHENARKPKFIKTVWGVGYTIE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggcatataatatattagttgttgatgatgaacaatcaattgctgatttaattgaatta
tatttacaaaatgaaaattatcatatttttaaatattattgtggtaaagatgctttagaa
agtttacaaaaaaatcattatgatctagctattttagatgtaatgatgcctgatttagat
ggttttagcttactaaaaaaaattcgtaaacactattactttccagtaattatgttgact
gctaaaagtaatgatttagataaaatcaatggtcttactctaggagccgatgattattta
accaaaccatttaatccattagaattagcagctagagtaaaaactcaacttagacgttat
ttacgatataatcaaaatccatctactaatcaacatatttatgattttaacggtttagta
attaataatcatacacataaatgtacactatatgaccaaccattaaatctaaccccaata
gaattctctattctttggtatttatgttcaaaacgcggtaatgttgtaacttcagaagag
ttatttgaagctgtctggcaagaaaaatatttagacaacaataatactgtcatggcacat
gtagctagattacgagaaaaaatgcacgaaaacgcccgcaaaccaaaatttattaaaact
gtttggggggtaggttataccattgaatag
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