Candidatus Thiothrix sulfatifontis: L3K52_05240
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Entry
L3K52_05240 CDS
T09924
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj01501
beta-Lactam resistance
tsj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L3K52_05240
01503 Cationic antimicrobial peptide (CAMP) resistance
L3K52_05240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsj03036
]
L3K52_05240
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsj02000
]
L3K52_05240
01504 Antimicrobial resistance genes [BR:
tsj01504
]
L3K52_05240
Chromosome and associated proteins [BR:
tsj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
L3K52_05240
Transporters [BR:
tsj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
L3K52_05240
Antimicrobial resistance genes [BR:
tsj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L3K52_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
VPS51_Exo84_N
Motif
Other DBs
NCBI-ProteinID:
UOG93136
LinkDB
All DBs
Position
1030318..1031466
Genome browser
AA seq
382 aa
AA seq
DB search
MRITTTTLRLLLLVLSIVGEMPTVARAAEIVRVEAVTSLSSSVLGSTVIPYREVTLSAQV
PGAVKFVSGEAGSGFNQGDVIVRIDESQLTAKRNAVLAQIAIAQATVQNAQAQYTRELIS
PRSKDIGAMPGFGLPAMFDMAMVRPFADSLMGNYDSDMGRYSDLMRSATDVSQAQSNLQQ
VMSQLQEIDAALGDTKSVAPFEGIVLEKLVEVGDTVQPGQPLIKFGYVKYKRLQADVPSG
LVSNLRVGMIIPAKLDSKTTIMVKLSQIYPVADPSRHTVTVKFDLPVDAIAAPGMYAEVY
LPETQAGDAKIVVIPKTALLRGRSLPSVLVVKNDNTSELRLVRLGAEQEKGKIEVVSGLS
ADERVIDKPPATASSGWMPHTE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaggataacaacaactacactgaggttgctattgttggtgcttagcattgtcggtgaa
atgcctacggtggcgcgagctgctgaaattgtgcgcgtggaagcggtgacgtcgttgtct
agctcggtcttgggaagtacggttattccttatcgcgaggtaacgttgtcagcccaagtg
ccgggtgcggttaaatttgtgtcgggtgaggcaggctcaggttttaaccaaggtgacgtg
attgtgcgtatagatgagtcgcaactcacggcaaagcgcaacgcggtgctggcgcaaatt
gcgattgctcaggcaaccgtgcaaaacgcgcaggcgcaatatacccgtgagttgatctca
ccgcgcagcaaagacattggggcgatgccggggtttggcttgcctgctatgtttgacatg
gcgatggtgcgcccgtttgcagactctctgatgggtaattatgactccgatatggggcgt
tactcggatttaatgcgtagcgctaccgatgtttcgcaagcgcaaagcaatttgcagcag
gttatgtcgcaattgcaagaaattgatgcggctttgggcgacacgaaatcggtagcaccg
tttgaaggcattgtgctggaaaaattggtcgaggtcggcgatacggtgcagccggggcag
ccgttgatcaagtttgggtacgtgaagtacaagcgtttgcaggcagatgtgccttccggt
ctggtgagtaatttgcgggtggggatgattattcctgctaaacttgacagtaaaaccacg
ataatggtgaaactctcgcaaatttacccggttgctgaccctagtcgtcacaccgtaacg
gtaaaattcgatttgccagtggatgcaatagcagcgccgggcatgtacgctgaggtatac
ttgccggaaacgcaagcaggtgatgctaaaatcgtggttattcccaaaacggctttgttg
cgggggcgtagcctgcctagcgttttggttgtgaaaaatgataacacttccgagttgcgc
ttggtgagattgggcgctgaacaagagaagggtaagatagaagtggtctccggtttaagt
gcagatgagcgcgtgattgataaaccacctgctaccgcgtcttctggttggatgccacat
acagaataa
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