Candidatus Thiothrix sulfatifontis: L3K52_09635
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Entry
L3K52_09635 CDS
T09924
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj01501
beta-Lactam resistance
tsj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L3K52_09635
01503 Cationic antimicrobial peptide (CAMP) resistance
L3K52_09635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsj02000
]
L3K52_09635
01504 Antimicrobial resistance genes [BR:
tsj01504
]
L3K52_09635
Transporters [BR:
tsj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
L3K52_09635
Antimicrobial resistance genes [BR:
tsj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L3K52_09635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Spore_YhcN_YlaJ
Motif
Other DBs
NCBI-ProteinID:
UOG90471
LinkDB
All DBs
Position
complement(1865707..1868796)
Genome browser
AA seq
1029 aa
AA seq
DB search
MNVSAWSIHNPVPAVLLFMLLSFLGIKGFQALGIQNFPDIDFPTIIVNASLEGADPEQLE
SEVARKIENQLATITGVEHLRTTLTDSSASIVVEFDIDKDTEVALNEVRNAIDTIRANLP
PQMNDPVVSKVTTAGSPLVTFTVAAPNMDEEALSWFVDNEITRELMAVKGVGQVSRVGGV
NREVRIDLNPALMAGLGVTAADVSSRLGQMQQDAPGGRGDVGGGIQSVRTLGRVGTATEL
GAIEIPLSNGRHVRLDQLATIRDTIAERSTHALLDGKAVVGFQVTRVRGASEIDVVEGVR
TAVTKLSSAYPQVQMAEAYDTIERIQANYTGSMHLLYEGAALAILVVFLFLRDIRATLVS
AAALPLAIIPTFAAMHYFGFSLNILTLLALALVVGVLVDDAIVEVENIERHLRMGKTPKQ
AAIEAADEIGLAVIATTFTLIAVFLPTAFMGGVPGKFFESFGITAAVSVFFSLAVARLLT
PMMAAYFLKPHNPKAHEKTAQPERDGWFMRHYMTAAGWCLKHRFITLVAAIAIFAGSMQI
IPLLPKGFVPPADTALTSVTLEMQPGSTLEESYAIAERARRLLQPLADVKQVFTLVGAAS
GVSSGPIAEGGGADVRKATLTVSLTTREERSRTQIAVEADIRQALKELPGVRYTVGSGGS
GDKTQVVLASDDGELLLTAAQRAERDLRTLQGIGNVVSGASLQRPEIHITPNYTRAAELG
VSTEALGQVVRVATSGDFSTRLPKLNLPQRQIPIRVQFDESVRNDLDTIRQLRIPGRNGA
VPLAAVADVQLGSGPARLDRFDRMRNVSIDVELNGLPVGQVTTMVDKLPSLATLPPGVIR
QSSGDAERMAELFGGFGGAMLIGVLLIYIVLVLLFHDFLQPITILAALPLSIGGALLALL
LTGSSFSMPAVIGLLMLMGIVTKNSILLVDYAVMARERDQKNRVDALLDACHKRARPIVM
TTIAMSAGMMPTALGLAADPSFRQPMAIVVIGGLLASTVLSLLVIPVVFTFIDDILVGFS
KLSGKFKHA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtttccgcttggtcaatccacaaccccgtcccggcggtgttattgttcatgttg
ctaagcttcttgggaatcaaggggtttcaagcgctcggcattcaaaatttccccgatatt
gatttccccaccattattgtaaatgcctcactggaaggcgctgaccctgaacagctcgaa
agcgaagttgcccgcaagatcgaaaaccagcttgccacgattaccggcgttgagcattta
cgtaccaccttgaccgacagttctgccagcatcgtcgtcgaattcgacattgacaaagat
accgaggtcgcgctcaacgaagtgcgcaacgctatcgacaccattcgcgccaacttgcca
ccgcaaatgaatgacccggtggtctcgaaagtgacgactgcgggcagtccactggtgaca
ttcaccgttgccgcgcccaacatggacgaagaagcgctgtcttggtttgtcgacaacgag
attacgcgcgaattaatggcggtcaaaggtgtcggtcaagtatcacgagtcggcggtgtt
aatcgcgaagtgcgtatcgacctgaacccggcactcatggcaggtttgggggtgacggct
gctgacgtttccagccgtttagggcaaatgcagcaagatgcacccggtggacgtggtgat
gtgggcggcggtattcaatcggtacgtaccttagggcgtgtcggtacggcaaccgaactc
ggtgccatcgaaattccgctctcaaacgggcggcatgtgcgcttggatcaacttgccacc
attcgcgataccattgcggaacgttccacacacgctttgctggatggcaaagcggtggtc
ggtttccaagtcacacgggtacgcggcgccagtgaaattgacgtggtagaaggcgtgcga
acagcggtgactaaactgtctagtgcgtatccgcaagtgcaaatggcggaagcctacgac
accattgaacgcattcaagccaattacaccggctcaatgcatttactgtacgaaggtgct
gccttagccattttggtggtattcctgtttttgcgggacatacgcgccacattggtatcc
gcagcagcgttgccgttggcgattattcccacgtttgcggcgatgcattactttgggttc
tcgctgaatattctcaccttgctggcgcttgcgttggtagtcggagtcttggtcgatgac
gcgattgtggaagtggaaaacattgaacgccatttgcgcatgggcaaaacgcccaaacaa
gccgccatcgaagccgccgatgaaatcgggctggcggtgattgcgaccacgtttacgctg
attgcggtgtttttaccgacggcgtttatgggcggtgtgccgggtaagttttttgaatcg
tttgggattaccgctgcggtatcggtgttcttctcgctggcggtggcgcgtttgctcaca
ccaatgatggcggcatatttcctgaaaccgcacaatcccaaagctcatgaaaaaaccgca
cagccggagcgtgacggctggtttatgcgccattacatgacggcggcaggctggtgtttg
aaacaccgctttatcacgttagtggcggcgattgcgatctttgcggggtcaatgcaaatt
atacccttgttacccaaaggcttcgtaccaccggcggataccgcactgacctcggtaacg
ctggaaatgcaaccgggcagcacgctggaagaatcctacgccattgctgaacgcgcccgg
cgtttgttgcaacccttagccgatgtgaaacaagtcttcacactggtcggtgcagccagt
ggcgtaagcagcggcccgattgccgaaggtggcggtgcggatgtgcgcaaagccacgctg
accgtcagtctcactacccgcgaggaacgttcacgcacccaaatcgcggtcgaagccgac
attcgtcaagcgttgaaagagctaccgggggtgcgttacaccgtgggttcgggcggttcg
ggcgacaaaacgcaggtggtgttagccagtgatgatggcgagctgttgctgaccgcagcg
cagcgtgcggaacgcgatttgcgcaccctgcaaggcatcggcaatgtggtgtccggtgcc
agtttgcaacgccctgaaattcacattacccccaattacacgcgggcagcagaattaggc
gtgagcaccgaggctttggggcaagtggtgcgcgtggcaaccagcggggatttttccacc
cgcttacccaagctcaatttaccccagcgccaaatcccgattcgggtgcaatttgatgaa
agtgtgcgcaatgatctcgatacgattcgccaattgcggattccggggcgcaatggtgcg
gtgccattagcggcggtggcggatgtgcaattgggcagcggcccggcgcgtttggatcgt
ttcgatcggatgcgcaatgtcagtattgatgtggaattgaacggcttacccgtcgggcaa
gtgaccaccatggtggataagttgccgagtttggcaaccctgccccccggtgtgattcgg
caaagttcgggggatgcggaacgcatggcggaactcttcggcgggttcggtggtgcgatg
ttgatcggggtattgttgatttacattgtgttggtgctgctgttccacgactttttacaa
ccgattacgattctggcggcattgcccttgtcaatcggcggggcgctgttggcattgttg
ctgacgggcagtagcttctcgatgcctgcggtcattggcttgctgatgctgatgggcatt
gtgaccaaaaactcgattttgctagtggattatgcggtgatggcgcgggaacgtgaccag
aaaaaccgcgtggatgcgctgttggatgcctgccacaaacgcgcccgtccgattgtgatg
accacgattgcgatgagtgcagggatgatgccaaccgcgttggggttagcggctgacccc
agcttccgccaaccgatggcgattgtggtcatcggcggcttgctggcgtcaacggtgctg
agtttgctggtgattccggtggtgtttacgtttattgacgacattttggtcggattcagc
aagctcagcggtaagttcaaacacgcctga
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integrated database retrieval system
