Candidatus Thiothrix sulfatifontis: L3K52_11910
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Entry
L3K52_11910 CDS
T09924
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj01501
beta-Lactam resistance
tsj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L3K52_11910
01503 Cationic antimicrobial peptide (CAMP) resistance
L3K52_11910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsj03036
]
L3K52_11910
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsj02000
]
L3K52_11910
01504 Antimicrobial resistance genes [BR:
tsj01504
]
L3K52_11910
Chromosome and associated proteins [BR:
tsj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
L3K52_11910
Transporters [BR:
tsj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
L3K52_11910
Antimicrobial resistance genes [BR:
tsj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L3K52_11910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
Laminin_I
Vps5
Motif
Other DBs
NCBI-ProteinID:
UOG90902
LinkDB
All DBs
Position
2370691..2371788
Genome browser
AA seq
365 aa
AA seq
DB search
MKMLVKCLLIIGLCGLSACGKAEHAADSDAVKTTSSSVLKTATVSAVGTPELHYLDGHVE
AVNESTISAQTSGVIEKLFYDVDDYVEPGKVIARIKSKNQQAGVEQAQASLDEAQARYTE
AQADFKRISEIYAKRLVPKADLDGAQAGLKAAEARLSASKAQVTQAGEQLGYTSLIAPYG
GIVTKRHVQLGEAVNPGTPVMTGISLDKMRVVVEVPQRLIAKVRQEKKAFVFQDGSNKSL
AVDSLTFFPYADPKTNAFKVRIDLKAGVQDLFPGMFVKVAFVMGQQQGVVSIPESAVVVR
SEVIGVYVLNAEGKPSLRQIRLGKKLDDNTISVLAGLAAGETIALDPVHAAISLKQQTAE
AKHDE
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgttagtaaagtgcttactgatcatcggattgtgtggattgtcagcctgcgga
aaagctgaacacgctgccgattcagacgctgtaaaaacgacttcatcctcggtgcttaaa
accgcgacagtcagtgctgtcggcacgcctgaattgcactatctcgatggtcacgttgag
gccgtcaatgagagcactatctccgcgcaaaccagcggcgttatcgaaaaattgttctat
gacgtagacgattatgttgaaccgggcaaggtaattgcgcggatcaaatccaaaaatcag
caagcaggtgtcgaacaggcacaagcttcattggatgaggcgcaagcacgctacaccgaa
gcgcaagcagatttcaagcgcatcagtgaaatttatgcaaaacgcctcgttcccaaagcc
gatttggacggtgctcaagcgggattgaaagcagcggaagcacgtttatccgcctcgaaa
gcacaagtgacgcaagccggtgagcagttgggttacacctcattgattgcaccttacggc
ggcattgtgaccaaacgtcacgtgcaattaggtgaagcagtcaacccgggcacgccagtg
atgacgggtatttcattggataaaatgcgcgtagtggttgaagtgccgcaacggttgatc
gctaaagtgcgccaagaaaagaaggcctttgtgtttcaagacggttctaacaaatcgtta
gcggttgattcacttacgttttttccgtatgccgatcctaaaaccaatgctttcaaggtc
agaattgatctgaaagcgggtgtacaagatttgtttcctggcatgttcgtcaaggtggcg
tttgtcatggggcaacagcaaggcgtggtgagtattcctgaaagcgcggtggtggtgcgc
agtgaagtgattggcgtctacgtgttgaacgctgagggcaagccttccttgcggcagatt
cgcttgggcaagaaattggacgacaataccatcagcgtcttggcaggtttagccgctggg
gaaaccattgcgctggatccggtgcacgcggcaatttcgcttaaacaacaaacagcggag
gcaaagcacgatgaatga
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