Trichinella spiralis: Tsp_01495 Help Entry Tsp_01495         CDS       T01609                                  Name (RefSeq) putative NB-ARC domain protein   KO K02084   apoptotic protease-activating factor Organism tsp  Trichinella spiralis Pathway tsp04215   Apoptosis - multiple species Brite KEGG Orthology (KO) [BR:tsp00001]  09140 Cellular Processes   09143 Cell growth and death    04215 Apoptosis - multiple species     Tsp_01495 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  NB-ARC APAF1_C Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WHD_APAF1 Beta-prop_WDR5 WD40 Beta-prop_WDR36-Utp21_2nd WD40_WDHD1_1st ANAPC4_WD40 CARD Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_TEP1_2nd AAA_16 NPHP3_N CFAP126 NACHT WHD_Dark nSTAND6 Motif Other DBs NCBI-GeneID:  10911449 NCBI-ProteinID:  XP_003377281 LinkDB All DBs Position Unknown AA seq 1433 aa AA seqDB search MLSEEQNLKLLNSQHSLLTDLEPKEITAYLQAAGVFSEDDIELINAKVTRRERVAELLTI YRRKARDLGPLVYALDKTGYRHLKIELVNSVSQVDRGAVPNSKHSLNILLINGKVPRKPE VYVERKEMKLKLKTALMRIDKEPGWIVLHGMGGCGKSVLAAAVVRDSEITGGLFSRVFWI TAGRNCDRIRSFALMQDLYSKMGKEFHRLDSVEEASSRLIELMLFDYPRTLLILDDVWTE SVVRLFDELQCRILALTRNASLFDVANNRKYFVLMEPSGYTRDEAMQAFASYLNCNESDL PLEALQIFHECRGHPLLISLIGALLKEHNSRWKFYYGLIHSQKLNNIKKVTHYKYATFNE AALLSLEDLTDDLKQLYFELAIFPLGVKISSQVLTVYWNKSIYEVEDIMAEFVKRSLLIK SSSDCEAVETYQIHALLHRVIKMSCHSDLRKTLHQKLLGNYLKVADDCWGKLPDHEYIFT FLGYHLFRADKFASFSDVFLNLKFLAKKIALCGPSSVLNDLIYYRKFIRDSHPTLFDQIE RLIKNNSFQLATNNGKYLSLIHLSLLNKNLSELYLEAERILQESDSSAVVDGFAKPYLKS WCKQSFGKDPNFTFSCNSVKTGVWMSRQKKIIYIGFDSCLGVCCTTTGLQLYRVVLNHVP NYLSFSDNNCTLFVAYGNYVGVFELDDHLKRSSTEQDDTTTGMDDLDCQRTPSPILNHLC NGLGFIRANEQQDQKHQDQQQQQQKVDENILGPKLLQVREFEVDNCGVELRFCLPARHYP WILCCDMEGSAKILEISQGRVSGGLDPQSRRNDRSTTTHITSCGFNGDDSLLAIGRADGV VELWNPADFGLRCRFAGHHSGPVLFCAFTGRFTSVECIFSACERRILLWKFDHSRDHHDD LKQSNSVELLEKIQPDQKHVRIIFNEIHKSNISIPEINLIDFVEIKTALLLASVQDYTLQ VSIITDTVGSVIETRRLFDRVSCLKWSPNECVLMIAFENGWIQSCQFDGNSLSELKKEFK TPQAPCCLAFSTVSDRFAVGCKEGCVAIQDAVIHCHGTAFFESAVTKCIFIDRHPHMNRL LICLQDGSFEILNIDSFVVEAILGLPVCMIVDFDVNSNCTYLATCWSGKQVKVWELDNLN PIFEENDFNNSLSKCKLSQSGNLLAVCESRGMVNLFKLPGGDLVQKIYAHSADIYDLVFY DDDDVLITLSAELKWWNLKLKSNQMRHWLLSTDSAKTLNIFPGHNLLVTVDHMQGYHVMQ IVSTGNLPVGRVNASTSIPPLSSGVEKFANASPPTIQNEQQLFASLPAELQAILVTDDFG MQSISKLPNELINEDSFATFSTISNEIPDDQSPTDHNDESVPLDSAETLLRHVFDLYSQD EAEQPSAEEMDTTETEDPKKIPSEVKGKKSVAGRLASIFNIATQLYTNSHYFT NT seq 4302 nt NT seq  +upstreamnt  +downstreamnt atgctcagcgaagagcagaatttgaaattgctgaacagtcagcattcgttgttgaccgat ttggagccgaaagagatcacagcttatttgcaagcggctggggttttttcggaagacgac attgaattaatcaacgctaaggttaccaggcgggagagggttgctgaattgctgacaatt tatcgacgcaaagctcgtgatcttggtcctttggtttatgcgttggacaagaccggctac cggcatttgaaaatcgaattggtcaattcggtcagtcaagtggatcgtggtgctgttccc aattcgaagcattcgttgaacattttgctcatcaatggaaaagtgccccgtaagcccgaa gtgtacgttgaacgtaaagaaatgaaactgaagttgaaaactgctttaatgcgcatcgac aaagaacccggttggattgtactgcacggcatgggcgggtgtgggaagtcggttttggct gccgctgttgtacgggattctgaaatcacgggcgggctattttctagagttttttggatc actgccggtcgaaattgtgaccgaattcgttcgtttgcgttgatgcaagatttgtacagc aaaatgggcaaagaatttcaccgtctggacagtgtcgaagaggcgagcagccgactcatt gaattgatgcttttcgattatccccggacgttgctaattttggacgacgtctggacagaa agtgtcgttcgtctgttcgacgaattgcagtgtcgtattttggctttgacgcgcaacgcg agcttgtttgacgtggccaataatcgcaaatattttgtactgatggaaccgtccggttat accagagatgaagcaatgcaagcgttcgccagctatttgaactgcaacgagagtgatttg ccattggaagctttacagatatttcacgaatgcagaggacaccctctgctgatttccttg atcggtgcccttctcaaagagcacaattccaggtggaaattttattatggtttgattcat tctcaaaaattgaacaacatcaaaaaagtcacccattacaaatatgcgacattcaacgaa gccgctttgttgagtttggaagatttgacggacgatttgaaacagctctacttcgaattg gccatatttcctctcggtgttaaaataagctcgcaagttttgaccgtttattggaataaa agcatttacgaagttgaagatattatggcggaatttgtcaaacgatcccttttgatcaaa tcgtccagtgactgtgaagccgttgaaacgtatcaaattcacgcgttgttgcatcgggtt attaaaatgagttgccattccgatttgagaaaaactcttcatcaaaaattgctcggaaat tatttgaaagttgctgacgattgttggggcaagcttcccgaccatgaatacatattcacc tttttgggctatcatttgtttcgtgctgataaatttgccagcttttcggatgtgtttttg aatttgaaatttcttgccaagaaaattgccctctgcggaccgtccagtgtgctcaacgat ctgatttattacagaaaatttatccgtgattcgcatccgacgttgtttgatcaaattgaa cgattaattaaaaataattcattccaattagctacgaacaatggaaaatatttgagtctt attcatctttctcttttgaataaaaatctcagtgaattgtatctggaagctgaacgaata ttacaagaaagtgacagcagcgcagtggtggacggctttgcaaaaccctatttgaaatct tggtgtaagcaaagttttggcaaagatccgaattttactttcagttgtaattcggtaaag actggcgtttggatgtcacggcagaagaaaataatttatatcggtttcgattcttgcctg ggggtctgctgtacaacaactgggttgcagttgtaccgagtggtgttgaatcatgtgccg aattatttgtcattttctgacaacaattgtacattattcgttgcttatggcaattatgtt ggcgttttcgagttggatgatcatttgaagagatcatccacagagcaggacgacaccact actgggatggacgacttggattgtcagcgtactccgtctccaattttgaatcacctctgc aacgggctcggctttattcgtgcaaacgagcagcaagaccaaaagcatcaagatcagcaa cagcagcagcagaaagtggacgaaaatattttgggaccgaagttgttgcaagtgcgcgag ttcgaagtcgacaattgtggcgtcgagctgcgcttctgcttgccggctcgtcactacccg tggatactgtgctgcgacatggaggggtcggcgaaaattttggaaatatcccaaggtcgg gtgtccggcggattggatccacaatctaggcgcaacgaccgatcgacaacgacgcacatc acgagctgcggtttcaacggagacgactcgctgctggccattggccgggccgacggcgtg gtcgaactctggaaccctgcggacttcggtctgcggtgccgctttgccggccatcacagt ggaccggtgctgttctgcgccttcaccggacgtttcacatcggtcgaatgcatcttttcc gcctgcgaacggcggattttgctttggaagtttgaccacagtcgtgaccatcatgatgac ctgaagcagagcaacagtgttgaactgttggaaaaaattcaacctgaccaaaagcacgtc cgcattattttcaacgaaattcacaagtcgaacatttccatacctgaaatcaatttgatt gattttgtcgaaattaaaactgcccttcttctggcatcggttcaagactacacattgcag gtttctattattaccgataccgttggaagtgtgatcgagacgagacgtctatttgacaga gtcagctgcttgaaatggtcgcccaacgagtgcgtattgatgattgctttcgaaaacggc tggattcagagctgccagttcgacgggaacagtttgtcggaattgaaaaaagaattcaaa actccacaagcgccttgttgtttggccttttctaccgtttcggatcgctttgctgtcggc tgtaaagaaggatgcgtggcgattcaagatgccgtaatccactgtcacggtactgctttt ttcgaatctgccgtcacgaaatgcatcttcatcgaccgtcatccgcacatgaaccgtctg ctgatctgcctccaagatggatctttcgaaatattgaacatcgactcgtttgtcgtcgaa gcgattcttggtcttccggtgtgcatgattgtcgactttgacgtgaattccaattgcaca tatctggcaacttgttggagtggaaagcaggtgaaagtgtgggaattggataatttgaat ccaattttcgaagagaacgatttcaacaacagcttgtcgaaatgcaaattgtcgcaaagc ggcaatctgctggccgtgtgcgaaagtcgcggcatggtgaatttgttcaaactgccgggc ggtgatttggtgcagaaaatctacgcccacagtgcggatatttacgacctggtgttctac gacgacgacgacgtgctgataaccctgtcggcagagttgaaatggtggaatttgaagctg aaaagtaaccagatgcgccactggcttttgtcgaccgactcggccaagacgttgaacatc tttcccggtcacaatctgctggtgaccgtcgaccacatgcaaggctaccacgtgatgcag attgtttccaccggcaacttgccagtcggtcgtgtcaacgcgtccacttccattccacca ttgtccagtggagttgagaaatttgcaaacgcttcacctccaacaatacaaaatgaacaa caactcttcgctagtttaccggcagaattgcaagcaattcttgtaaccgacgactttgga atgcaaagcatctcaaaattgccgaatgagttgataaatgaagattcttttgcaacattt tcgacgatatccaatgaaattcccgacgaccaatcgcccactgaccacaacgacgagtcc gttccattggattcagcggaaacactgctcaggcatgtgttcgatctttattcacaagat gaagccgaacaaccaagtgccgaagagatggacaccaccgaaaccgaagaccctaaaaag ataccctcggaggtgaaaggaaaaaaatccgttgccggacgacttgcttccatattcaac attgccactcaactgtacacgaactctcactattttacatga

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