Trichinella spiralis: Tsp_01719
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Entry
Tsp_01719 CDS
T01609
Name
(RefSeq) putative tRNA pseudouridine synthase tag-124
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsp03016
]
Tsp_01719
Enzymes [BR:
tsp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
Tsp_01719
Transfer RNA biogenesis [BR:
tsp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tsp_01719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2973
Motif
Other DBs
NCBI-GeneID:
10911973
NCBI-ProteinID:
XP_003377553
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MKLCRKLEMHFTTGIIKPYEMPRKVERQFDFSRYCRRHIALMVAYLGWDLDGFCAQNNSQ
NTVESKIFKALIETKLIQSLETANYSRCGRTDKTVSAFSQVLSLDVRSNQTTGVGVFEPD
GYCPNEPKPTSRKTTPKSEELDYAKILNSVLPQEIRVLAWAPVERTFNARYNCTSRQYKY
FFPKGALNLKVSTVVDFLHFSAIVALFSNFRRGTICVYFQLMEQASKRLIGEHDFRNFCK
IDMSKNEIQSCVRTVFDVQFTKVNAGGLNSRTLCCFTIVANAFLWHQIRCIMSVLFAIGE
GKEQPDVIEWLLNTELCPAKPQYSMVVGWPLVLYGCQYDNLEWHWKEGIIMECISNLQRT
LVNFAIKVEIIENMMNSLLSLMPNNSTTADLNTTSILHPELLSHSYRPLKGRSVGKSLEE
KIAKKKKQQLGTKRTTADDTTKQSLNEEEEEEAMEKKAQRFTVVVVVVVEK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtgccgtaaattggaaatgcatttcacaactggtattattaaaccgtatgaa
atgccaagaaaagttgagaggcagtttgattttagcagatattgtcggagacatattgca
ttgatggttgcatatcttggttgggatttggacggtttttgtgcgcaaaataattcacag
aacactgttgaatcgaagattttcaaagctttgattgaaacgaaattgatccaatctctg
gaaacagctaattacagtcgctgcggtcgtacagacaaaacagtcagcgctttcagtcaa
gttctgtcgttggatgtacgaagtaaccagacaacgggcgtgggcgtttttgaacccgac
ggctattgtcccaacgagccgaagccaaccagtcggaagacaacgcccaaatcggaggag
ctcgactatgcaaaaattctcaacagcgttctgccccaagaaattcgagtcctcgcctgg
gctccggtggaaagaacgttcaacgctcgatacaactgcacttccagacagtacaaatat
ttcttccccaaaggtgcactgaatttgaaggtgagtactgtagtggattttctccatttc
tcagcaatcgttgctttgttttccaactttcgacgtgggactatttgcgtgtattttcag
ctgatggaacaagcgtccaaacggttgattggcgagcatgattttagaaatttttgcaaa
attgacatgtcaaaaaatgaaatccaatcctgcgttcgtactgtattcgacgttcagttt
acaaaagtgaacgcaggtggactgaactcgcgaacgttgtgctgttttacgattgttgca
aatgcatttttgtggcaccaaatacgttgtattatgagcgtactgtttgccattggtgaa
gggaaagagcagccggatgtaattgaatggctgttgaatactgaactctgtcccgccaaa
ccgcaatattctatggtcgtgggatggcctttggttttgtacggttgtcaatatgataat
ctggaatggcactggaaagagggaattataatggaatgtataagcaacttgcagagaact
ttggttaattttgcaattaaagttgaaataatagaaaatatgatgaacagtttgttgagt
ttgatgcccaacaattctacaactgccgatttgaacacaacttcaattttacatccagaa
ttgttgtcccactcctaccgacccttgaaaggcagatcagttggaaaatcgttggaagaa
aaaattgcgaaaaagaagaaacaacagcttggaacaaaacgaaccaccgctgacgatacc
accaagcaatcattgaacgaagaagaagaagaagaagcgatggaaaaaaaagcacaaaga
tttacagttgttgttgttgttgttgttgaaaaataa
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