Trichinella spiralis: Tsp_01940
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Entry
Tsp_01940 CDS
T01609
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase 1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00280
Valine, leucine and isoleucine degradation
tsp00650
Butanoate metabolism
tsp00900
Terpenoid backbone biosynthesis
tsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Tsp_01940
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Tsp_01940
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Tsp_01940
Enzymes [BR:
tsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
Tsp_01940
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_CoA_synt_N
HMG_CoA_synt_C
Motif
Other DBs
NCBI-GeneID:
10907159
NCBI-ProteinID:
XP_003377752
UniProt:
E5SDX7
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MRSGSALQFSTVQSRGIVEIINEKIMVFVNSKSKNSMGDLSFILQRNSSSLKNNVYYIKT
MKLMDGRVMMENDSVMPNLISASNVGILAMQVYFPSMYVKQSELESADGVSKGKYEIGLG
QHEMAVCSDREDACSMALTVVHRLLKRFNVEPMEIGRLEVGTESQVDRSKSVKSTLMQLF
TDSGNTDLEGVDVVNACFGGTQALFNCVSWVESTSWDGRYALAVATDVAVYDAGPARCTG
GAGAVAMLVGVDAPIVFDGRLKAFYMQDAYDFYKPTAAGATEYPVVDGALSVRSYFEALS
RCYGLYCAKFERLCGKEARVMDFDAVLFHSPYCKLAKKALIRLVFVDLCRCVVGPSQLNP
NMPNKGVPVRFDEDRLLTLDLDRNEEAWLMELSGSLFETRTKPSLLAACRVGNMYCASLW
TSLACHLAGSSADKLVGQRLLMFSYGSGLASCMFSVQLRRGRENEVKLENIASMLADAMS
QLEMRNKLSPEEFLSTMETREKAASSAPYIPTAQLEHLSNETFYLVNVDEKCRRKYALKV
SEENEALSS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcaggttcagcattacaattttcgactgtacaaagtcgaggtattgttgaaatc
atcaatgaaaaaataatggtgtttgtaaacagtaaaagtaagaattcgatgggcgattta
agtttcattctacaaaggaacagttcatcattaaaaaataacgtgtactatatcaaaaca
atgaaattgatggatggccgagtgatgatggagaatgacagtgtgatgccgaatttgatt
tcggctagcaacgtcggcatattggccatgcaggtatattttccttcgatgtacgtgaag
cagtcggagttggaatcagcggacggcgtttcaaagggcaagtatgaaattggtttgggt
caacatgaaatggctgtttgctcggaccgtgaagatgcgtgttcaatggcgttgaccgtt
gtccatcgactgttgaaacgcttcaatgtggagccgatggaaatcggcagattggaagtg
ggcaccgaatcccaggtcgacagatcgaaaagcgtcaagtcgacgttgatgcaactgttc
acggatagcggaaatacagatctcgaaggtgttgatgttgtgaacgcttgtttcggaggt
acgcaggcgttgttcaactgcgtcagttgggtcgagtcgaccagctgggacgggcgctat
gctttagcagtggcgaccgacgtggcggtctacgacgccggacccgcgaggtgtaccggg
ggtgcaggggcagtggcgatgcttgtgggcgtcgacgcgccgatcgtgtttgacggtcgg
ctgaaagcgttctacatgcaggatgcgtacgatttttacaagccaaccgctgccggagcc
accgagtatcccgtcgtcgacggcgcactcagcgtgagaagctatttcgaggcgctttcg
cgttgctatgggctttattgtgcaaaattcgaacgtctctgtggaaaggaggcccgggtg
atggatttcgacgctgtgcttttccattcgccttactgcaaactggccaagaaagctttg
attcggctagtgtttgtggatttgtgccgttgtgtggtcggtccgtcacagttgaatcca
aacatgcccaacaaaggtgtaccggtgagatttgacgaagaccgactgttgacgttggat
ttggacagaaacgaagaagcatggctgatggaactgagcggatcgctttttgaaactcgc
accaaaccgtcattgttagctgcttgcagagtgggaaatatgtactgtgcatcgttgtgg
acgtcgcttgcttgtcatttggctggtagcagtgctgacaaacttgtcggacaacggttg
ctgatgttttcttatggatctgggttggcgtcttgtatgttcagcgttcaactgcgccgg
ggtcgggaaaatgaagtgaagctggaaaatattgcctctatgcttgctgatgcgatgtcg
caactggaaatgcgaaacaagctgtcgccagaggaattccttagtacaatggaaacgcgt
gaaaaagccgcatcgtcggcgccgtatattcccacagctcagttggagcatctttcaaac
gagacattctatttagttaatgttgatgagaaatgtcgtcgtaaatatgctctgaaagtt
tcagaagagaatgaagcgctgtcttcttaa
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