Trichinella spiralis: Tsp_01979
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Entry
Tsp_01979 CDS
T01609
Name
(RefSeq) glycosyl hydrolase family 47
KO
K10085
ER degradation enhancer, mannosidase alpha-like 2
Organism
tsp
Trichinella spiralis
Pathway
tsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Tsp_01979
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tsp04091
]
Tsp_01979
Lectins [BR:
tsp04091
]
M-type lectins
Tsp_01979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_47
Motif
Other DBs
NCBI-GeneID:
10907205
NCBI-ProteinID:
XP_003377795
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MTVQIQKREKVKRIFLHAYDSYIQYAFPFDELKPISCAGMNSWGSFSLSLIDSLDTLIIM
GNYSEFRRVANIIIDGFDSCADVNVSVFETNIRVIGGLLSAHILSKTANMELEQGWPCQG
PLLRLAESVASKLLPAFKTTTGMPYGTVNLRHGVCENETSITCTAGIGTFLLEFGTLSRL
TGNYTYERAALNALQQLWNHKSSIGLVGNHIDVQTSMWTATDAGIGGGVDSYFEYLVKGG
ALINSESLLKHFNEYRKVIDKYMNHQDWFPWVSMYSGQLSLAVFQSLEAFWPGLLTLIGD
VGAARRIMLNYDLILSQYGMTPEFYSIHKMEADKRSGYPLRPEVAESLMYLYRETEDPML
LRMGASIIEAIESSSKTTCGYATVYNVADHSIEDRMESFFLAETTKYLYMLFDPDNAIHD
ISEEKFVIYGPHGKCVINSGGYIFNTEAHPVDSSINSCCASTRLEDIEQFVDFQDNLDLL
AIAESELKFGQLEEEKNYESCLANKGEAVNEKKLTKMKCSSVTSKPNCRISSALISDSNL
RVERKSQMKKNYENLRRTILNGIVEEDVFATVWIGKLLPRGSLFRRLHVLKRTCFNSCMK
CMARSVGVKPIMGNVDEYASNMHSSSFIEKDFYSVFSLPPLQQCKIQKHII
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgactgtccaaatacagaaacgggaaaaggttaaaagaatttttcttcatgcttacgat
agctacattcagtatgcttttccttttgatgaactgaaacccatatcttgcgctggaatg
aattcgtggggaagtttttccctttctttaattgattctttggacactcttattataatg
ggaaactacagcgagtttcgacgagtcgctaatattataattgacggttttgattcttgc
gccgatgtaaatgtttcagtatttgaaacaaatattcgagttattggtggtttattatcg
gcacatattttatctaaaactgcgaacatggaacttgaacagggctggccttgtcaaggc
ccgttgttgcgattagcagaaagcgttgcaagcaaacttttaccagcttttaaaacgact
actggaatgccatatggtacggtaaatttgagacatggtgtttgcgaaaatgagacttct
ataacatgtactgctggtattggaacatttttactggaatttggtacattaagccgcttg
actggaaattatacatacgaaagagcagcgttgaatgcattgcagcaactttggaatcat
aaatcatcaattggtttagtgggaaatcacattgatgtgcaaacctccatgtggactgca
actgatgcaggtattggcggtggtgttgattcatattttgagtatttggtgaaaggaggt
gcgctaattaattcagagtcattgttgaaacattttaacgagtatcgaaaagtcatcgat
aaatatatgaatcatcaagattggtttccttgggtatcgatgtattcagggcagttatct
ttagctgtttttcagtctcttgaagctttctggcctggcttactgacactgattggtgat
gtcggagccgctcgacgaataatgctcaattatgatcttatcttaagtcagtatggaatg
acgccggagttttattcaatccataaaatggaagctgataaacgttctggttatcctctt
agaccagaagtagcggagagtttgatgtatttatatcgagaaactgaagatccaatgctg
ttacggatgggggcatcaataattgaagcaattgaaagtagctcgaaaactacatgcggt
tacgcaacggtgtataatgtggctgatcattcgatcgaagatcgaatggaatcatttttt
ctcgccgaaactacaaaatatttatacatgctgtttgatcctgataatgctatacacgat
attagtgaggagaaatttgtgatttatggacctcatggtaaatgtgtaataaattctggt
ggatacattttcaacacagaagcccatcctgttgattcatcaattaatagctgttgcgct
tcaactcgtcttgaagatattgaacaatttgtagattttcaagataacttggatttgcta
gctattgccgaatctgaattgaaatttggtcaattggaagaagaaaaaaattacgagagt
tgcttggcgaataaaggagaagcggtaaatgagaagaaattgacaaaaatgaagtgcagt
tcagttacctctaaaccaaattgtcgtatatcgtctgcattgatttcggacagtaattta
cgagttgaaagaaaatcacaaatgaagaagaattatgaaaatcttcgtcgtacaattttg
aatggtattgtggaagaagatgttttcgcaactgtttggataggaaagttgttacccagg
ggatcgttgtttcgccgattgcatgttttaaaaagaacctgcttcaatagctgtatgaaa
tgcatggcgagaagcgtgggagtaaaaccgatcatgggaaatgtggatgaatatgcttca
aatatgcacagcagttcatttattgaaaaagatttctattctgttttctccttacctcct
cttcagcagtgtaaaatacaaaagcacattatctga
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