KEGG   Trichinella spiralis: Tsp_02048
Entry
Tsp_02048         CDS       T01609                                 
Name
(RefSeq) putative 3'-5' exonuclease
  KO
K20777  exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsp03400]
    Tsp_02048
Enzymes [BR:tsp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     Tsp_02048
DNA repair and recombination proteins [BR:tsp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     Tsp_02048
SSDB
Motif
Pfam: DNA_pol_A_exo1 PLA2_inh
Other DBs
NCBI-GeneID: 10907368
NCBI-ProteinID: XP_003377866
UniProt: E5SE79
LinkDB
Position
Unknown
AA seq 535 aa
MAEESDNLRDESCDVYCKWNRNPGNVRNIYIVKSWDEWENVLNDLQLDIDKVPVLGLDCE
WSADCSSNATGRNVSLVQFATAFGVCILVRLSQMNTPTSSFVTVLENSKVMKVGLGIEQD
VKRLYLDHGIVVRGKFDVRYLLDVDQRNISLQTLVKNCFDHVLVKLTKVACSNWDATELT
EAQIQYASSDAQYSLDCFLKSLSNKLLDHSWTMWCSCAQTAAQKALDDYDHRPVRQKNFS
KTCSKQLKPKIASTSPSRFALKGPHYQNCILIGPDGDLLSRLPKKKLMWYVKNNLGDVVS
QLSDEHWKLFSCAEEDPPFVVQLRFQPKVVASKESYYIKEKENQCVVCGRLDLLMRKRII
PHLYRRLFPEELKSFRSHDILLLCFDCHRKAEYYDTLFQRSLAEQCDAPLRLAEQQEDKF
SKDAFKIRGYARTLKFHFDQLPDDRREYLQKQLALFFQQDKFQLDLIEKAIEMEKPNATH
RNNIYDTHAECVVNYYANSEIGLSGFEKLWRKRFVDLMKPKFLPSLWSVDASFIY
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggccgaagaaagtgataatttgcgagacgaaagctgcgatgtatattgtaaatggaat
agaaatccgggaaatgttagaaatatttacattgtaaaaagttgggatgaatgggaaaat
gtgttgaatgatttgcaattggacatcgataaggttcctgtacttggattggattgcgag
tggtcggcagattgctcttcgaatgccaccggtagaaatgtgagcttagttcagtttgcc
accgcgtttggtgtttgcattctggttcgtctgtctcaaatgaatacaccgacgtcgagt
tttgtcacggttctcgaaaattcaaaagtgatgaaagttggtttaggcattgaacaggat
gtgaaacgtctttatctcgatcatggaattgttgtccgaggtaaatttgatgtacggtat
ttgttggatgtggatcagcgcaatatatctttgcaaacattggtgaaaaattgtttcgat
catgtgctagtgaaactgactaaagttgcttgtagcaattgggatgcaacagaattgacc
gaagcgcagattcagtatgctagttcagatgctcagtattcattggattgctttttgaaa
tctctttccaacaaacttttggatcacagttggacaatgtggtgctcatgcgcgcagact
gctgcacagaaagccttggatgattacgatcaccgtcctgtcaggcagaagaatttcagc
aagacatgctccaaacagttgaaaccaaaaattgcaagcacatctccttcgagattcgct
ctgaaaggtccccattatcagaactgcattctgattggaccagacggggatttgttgtcc
cgattgccgaagaagaagctgatgtggtatgtgaaaaacaatttgggcgatgttgtatct
cagttgtcggatgaacattggaaattattttcatgtgctgaagaagatccaccgtttgtg
gtgcaactgcgatttcagccgaaagtggtcgcttccaaggaaagctattacatcaaagaa
aaggaaaatcaatgcgttgtttgtggtcggttggatttgctgatgcgcaagcggatcatt
ccccatttgtaccgacgactttttcctgaagaattgaaatccttccgcagtcatgacatt
ttgcttctatgcttcgactgccatcgaaaagctgaatattatgatacgcttttccaacgg
tcacttgccgaacaatgcgacgctccactgcgcctggcggagcaacaagaggacaaattt
tccaaagatgcattcaaaattcgcggctacgcccgtactttgaaatttcacttcgaccaa
ttgccagacgaccgaagagaatacttgcaaaagcagttggcgttattttttcaacaagac
aaattccagttggatttgattgaaaaagctatcgaaatggaaaaaccaaacgccacgcat
aggaataatatttacgacacgcacgcggagtgtgttgtgaattattatgcaaattcagaa
attggcctcagcggttttgaaaaattgtggcgtaaacggtttgtcgatctgatgaaaccg
aaatttcttccctctctttggtctgtcgacgcgtcattcatttactga

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