Trichinella spiralis: Tsp_02454
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Entry
Tsp_02454 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K13708
dedicator of cytokinesis protein 1
Organism
tsp
Trichinella spiralis
Pathway
tsp04148
Efferocytosis
tsp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Tsp_02454
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
Tsp_02454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_02454
Membrane trafficking [BR:
tsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
Tsp_02454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_DOCK
DHR-2_Lobe_A
DHR-2_Lobe_C
Motif
Other DBs
NCBI-GeneID:
10908010
NCBI-ProteinID:
XP_003378178
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MIILKGSNAGKERFHELICSLFISLTTLMLYQTDWSLLCQGAALKYIPHIVVDVLAVFDA
RELAAMMANFLKNVPRDRLTKQKLMCLQDLVHSELIKKSGAHCDKPRAVLLPVILESVRN
QIDDNEELELCAQILTEIMNVLFDKHSTSGAHSSTLLFIMRTILRQVVQVVVRLIEAGEN
LILGQYVALLLAILEELDACTYRCYIAEFATRTDLMDFLTELLMLFKDLIRRPVCNSFFQ
TVVTFITQKLLQLEQYNVKKRKAILERFRDMRLTCARELVRSMWFSMNCKLIFYMLEKNQ
FIPSLVGFVLEVTLIPVEEVRKLTIPIFFDMMVTEFYLRANNNSATTSTPLLGNFSYNSS
VMEFETEFIKKLDSLVENDYGDAKYVDTFVKIMMQLCSSHTEALRDEGIRFTKTVEHLMF
RLLEFRNVRLYHNNVNNCMSCTNFYYEIGHTELYIRYLYKLYELHMQRDNFVEAGLTMAL
HAECLKWCDSSVHALLAHSLFPDCVSQRELKEKLFLKMIDLFDRGELWEKAIVVCQELQH
EYEHRTYEYDKLANLLEKMSKMYRNILKHQRAEPEYFRVLFCGLGFPIFLQNTTFIYRGD
GYERLADFTGRIQAQYPNATLLQTLQPPGEEIKRSNGQYLLINKVDPIYDDQIKTIPTPV
KDSHCTLSKEWPVADEQENEFGLMWLEKTILVTSCRFPGILRWFLVSSESQVELSPLEVA
VDSMKATISDLEKLIEEVERYSERALKPLAAKLQGMLQPAVMGEFMSKGSRKNLEVLELL
KEQIASQVPLLEKGIFLHAKFCSSDQREFHHLLIDCFKEYKSHVEQHYGKQASLLPENSS
LEIPKSNVLVYKQNLIDGSATSNDGRYPFSSSIASRKSNSVREWQASTSAPWLLRTGVMT
TLSGATVPRRINSKEAAIRRKAAHSTEKEIHQKRHSNSSMGSTQSAEMSCAGSTIVLTEK
LTTLRPPRPDSSFSKGSFKQQSNSSINRLTILTNDRIDDHAAVPPPLPPRRDSGQIEIPD
FNASSVTFSPLSPQRLPSIISGPRREKKTQQSRQRGKHLHRSQFPCPLVQHVHCVSSLEF
VVVFAYAVENAEEETKQNKQ
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgataatactgaaaggttcaaatgctggaaaagagcgtttccatgaattgatatgcagc
ttgttcatctcgttgaccactttgatgctttatcagaccgactggagtcttctttgccaa
ggagccgctttgaaatacattccacatattgttgtggatgtgttggcagttttcgatgcc
cgcgagttggcagcaatgatggcaaattttctcaaaaatgtaccacgggatagattgacg
aagcaaaaattaatgtgccttcaagatttggttcattcagagttgatcaaaaaatcaggt
gcccattgcgataaaccaagggcagttttgttgccggtaattttggaaagcgttcgaaat
caaattgatgataacgaagagttggaattgtgtgcgcaaattttaacagaaataatgaac
gtgctatttgacaagcattcgacctccggtgctcacagttctacgcttctttttataatg
cgcacaattttgaggcaagttgttcaagttgttgtccgattgatcgaagccggtgaaaat
ttgattttaggacaatacgttgcgttgctgttggcgattttggaagaactcgacgcttgt
acgtatcgttgctacatcgctgaatttgccacccgcacagatctgatggattttttaact
gaactactgatgctgttcaaagatttgatcagacggccagtttgtaatagtttttttcaa
acagtcgtaacattcatcacgcagaaattgctacaactggaacaatacaacgtaaaaaag
cgaaaagctattttggaaaggtttagggacatgcgccttacatgtgccagagagttggtc
cgatccatgtggttcagcatgaattgtaagttaatattctacatgctggagaaaaatcaa
ttcatcccgtcgctggttggctttgtactcgaggtgacgcttattccagtagaagaagtg
cgcaagttgaccattccaatatttttcgacatgatggttacggaattttatttgcgcgca
aataataattcagccactacttcgacgccacttttgggaaatttttcatacaacagttct
gtaatggaatttgaaactgaattcataaagaaacttgactcattggtagaaaatgattat
ggtgatgcgaaatacgtcgatacatttgttaaaataatgatgcagctgtgttccagtcat
acggaagcgttgcgtgacgaaggaatacgattcacaaaaactgtggaacatttgatgttc
aggcttttggaatttaggaatgttcgactgtatcacaacaatgtgaacaactgtatgagt
tgtactaatttctattatgaaattggtcatactgaattgtacattcgctatttgtacaag
ctgtacgagttgcatatgcagcgagataattttgtagaagcaggtctgacgatggcattg
catgccgaatgtttgaaatggtgtgacagttcagttcatgcattgcttgctcatagttta
tttccagactgcgtttcgcagagagagttgaaggaaaaattatttttaaaaatgatcgat
ttgtttgatcgaggagaactttgggaaaaagcaatcgtcgtttgccaagagttgcagcac
gaatatgaacatcgtacatacgaatacgacaaacttgccaacttgctggaaaaaatgtca
aaaatgtacagaaatattttgaaacatcagcgggcagaaccagaatattttcgtgttctt
ttttgtggtttaggttttccaatttttttgcagaatacgacgttcatttatcgaggcgat
ggttacgaacgattggcagattttactggtagaattcaagcccagtatccaaacgcaact
ctgttgcaaactttacaaccgccgggtgaagagatcaaaaggtcgaatggtcagtacttg
ctgatcaacaaggtggatccaatttacgacgatcagatcaagacaattcctacgccggtg
aaggatagtcactgcacattgtccaaagaatggcccgttgctgatgaacaagagaatgag
ttcggtttgatgtggttggaaaagacaatattggtcactagttgtcggtttcctggtatt
ttacggtggtttttagtctcctcagagagccaggttgaacttagtccattggaagttgct
gtcgactcgatgaaggccaccatttctgatttggagaaattaatcgaagaagtggaacgt
tactcggaacgtgctcttaaaccgttggctgccaaattgcaaggcatgctacagccggct
gtgatgggtgaatttatgtcaaaagggagtcgaaaaaatttggaagtgttggaactgctg
aaagaacaaatagcttcgcaggttcctctgcttgagaaaggaatttttcttcatgcgaaa
ttttgttccagtgatcaacgcgaatttcatcatttgctgatcgactgcttcaaagagtac
aaaagtcacgtggaacagcattacggcaaacaggcgagcttgttgcccgaaaatagctct
ttggaaataccgaaatccaacgtgcttgtgtacaagcaaaatttgatcgacggatccgcc
acgtccaacgacggtcggtatccattttcgtcgtccattgcaagcagaaagtcgaactcg
gttcgagaatggcaagcgtcgacatcggcaccgtggttgcttcgtactggtgtgatgact
acactgagcggcgcaacagtgccaagaaggataaatagcaaagaggcggctattcggcgg
aaagcggcacacagcacggaaaaagaaattcaccaaaaacgacattcgaacagttccatg
ggctctacgcaaagtgctgaaatgagttgtgcaggatcgacgattgttctaacagagaag
ctgaccactttgcgtccaccccgtccagattcgagcttttccaaaggtagtttcaagcag
cagtcgaactcgtcgatcaatcgactgaccatattgacgaatgatcgaattgacgatcat
gctgcagttccaccgcctctgccacccagacgagatagtggtcaaattgaaattccagat
ttcaatgcttccagtgtcactttttcgcctttatctcctcagcgactgccaagcattatc
agtggtcctcgacgagaaaaaaaaacacaacagagtcgccaaagaggaaagcatctgcat
cgatcacagttcccgtgtccattggttcagcatgttcattgtgtgtcctcattggaattt
gttgttgtgtttgcatatgccgtagaaaatgcagaagaagaaacaaaacaaaacaaacag
tga
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