Trichinella spiralis: Tsp_03084
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Entry
Tsp_03084 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K12173
BRCA1-A complex subunit BRE
Organism
tsp
Trichinella spiralis
Pathway
tsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tsp_03084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_03084
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_03084
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_03084
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
Tsp_03084
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
Tsp_03084
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
Tsp_03084
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
Tsp_03084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
10900363
NCBI-ProteinID:
XP_003379423
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MTRNLESSSDKNTSQETFCYKSYNDSSVRCLVDWLKTPVKHFLDFPFFGCFKANICKIQS
GASSFVSQQLKNVPLGDRFRIFINFGDFEFSCYVVFQWSHQLLPPEFYFNEENFIPDVEM
IEAYTKWDISNPNCLLDLFLELFMKYQDFHLYNCYSNSIIRLHLNSLELSKYEDILAFLG
RGGYLTCIIRIDLEQLFCLPEILTNVNKQMLKTLSHCNNMHTMVESFYLRMLVRAENQWE
YREEFIRMLKESNRFLNVTADEEMFYSFSFCATLEEFTFCVQGIEICFMTTDSISCSLFN
SETAFGYYPSPNSL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtaatttggaatcatcatcagataaaaatacaagtcaagaaaccttttgttat
aaaagctataacgattcgtcggttcgatgtttggtcgattggttgaagacgccggtgaag
catttcttggactttccgttttttggctgttttaaagccaatatttgtaaaattcaatct
ggggcgagttcgttcgtttcacagcaattgaaaaatgtgccgttaggtgatcgttttcga
atattcatcaattttggagactttgaattttcgtgttacgtggtattccaatggtcacac
cagctgctgccgcctgaattttactttaatgaggaaaacttcattccagatgttgaaatg
atagaagcatacacgaaatgggatatttcgaatcccaactgcctcttagatttgtttctc
gaattgttcatgaagtatcaagattttcatctttacaattgttattcgaacagtataatt
cgtctgcatttgaactcgttggagctgagcaaatatgaagatattttggcatttttggga
agagggggctatttgacttgcatcattcgaattgacttggaacagttgttttgcttgcca
gaaattttaacaaatgtaaacaaacagatgctgaaaacgctttcacactgtaataatatg
catacgatggttgaaagtttctatttaaggatgttggtgagagctgaaaatcagtgggaa
tatcgtgaagaatttattcgcatgctgaaagagagcaacagatttttgaacgtaactgcc
gatgaggaaatgttctacagtttttcattttgcgcaactttggaagagttcacattttgt
gttcaaggtattgaaatttgcttcatgacaactgactctatttcatgttcgcttttcaat
agtgaaactgccttcggatattatccaagccccaatagtttataa
DBGET
integrated database retrieval system
