KEGG   Trichinella spiralis: Tsp_03329
Entry
Tsp_03329         CDS       T01609                                 
Name
(RefSeq) putative tetratricopeptide repeat-containing domain protein
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tsp03036]
    Tsp_03329
Enzymes [BR:tsp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     Tsp_03329
Chromosome and associated proteins [BR:tsp03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     Tsp_03329
   Histone demethylases
    Tsp_03329
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_2 TPR_1 TPR_17 TPR_11 TPR_12 TPR_16 TPR_8 TPR_19 TPR_CcmH_CycH ARM_TT21_C DUF2652
Other DBs
NCBI-GeneID: 10908825
NCBI-ProteinID: XP_003379673
LinkDB
Position
Unknown
AA seq 1208 aa
MRFLHFSTEFGCLNLVHPEKIFERRLALKFYEQRLEEIQRSTDAAVETDNRFLCEVLLKL
GHLNLLIHDFVKALSAYQRFYECKAEYWKDAPFLYGLGLVYFHFNIHKSATEVFQRLLYL
FPNFCKAAEVNIRLGLAFKALHSFDLAIKNLRLAFVDPNPTIFSKAEIRFHIAHCIELKG
DLKKAHSEYQSLLQSSQVVSPVLRASLLRQLGWLFFREESFGDKAHRISVAINCLQQSLK
ADPTSGRSHYYLGRCFSAAGRAHEAFLSYRHSIDKNESNADIWCSIGVLYQQQQQPFDAL
QAFVCAIQLDDSLSPAWIDLGLLYEQYFQLNDALKCYKNALKLKSKINQALFDRIEFLET
QLKGRTKVSVDGENSKSAPLLPNIEDVSRLPIPAQLLDRQNGYQRQRIDMYLKGSLIGIG
LNESEDGALPSLNSQQIQMMHILSQNQALLNPHQMLTLRQLQETHALTQHFQQQREQQRD
EEDNVSRSQETVNVDPITSTEIGMRTSPLSDLPQVTQEDLQAFLGFTDQEDLTNSCLEPD
NRNKARIDKNDPIIPTNVLFSTPVTIQDSVNSDRPAFLAEPPPSCLSLTAPLNVPCSISS
NEIFQICKQRNLGRCKSVYEENVLPPQPPTCNRNLPKDKLLLTTPCTVVDTKKDASSLEL
QRFCYQQPIVVIRGLTSALKMDLSLFSTKTIVAEAANQQVELRTQYLQASDVNVDSQGNV
TWQCGSQPSYTTVGKYAAYQLQSFQNALKDDKEKMKREGDVECNSSKRKKDVALKKVVKF
GTNVDLSDERKWHLQLKELNKLPSFCRVYSSCNLLSHLGHVVLGMNTVQLYMKVPGARTP
GHQENNNFAGVNINIGPGECEWFAVPYEYWDAVKTICENNKCDFLRGSWWPSLEDLYENN
IPLYRFTQKAGDVVWIGEGTVHWVHSTGWCNNIAWNVGPLTASQYQLAIERYEFNKLNSY
KSLVPLIHLSWQLARNIRFSDKTLFEMVRKTLIQSIAYCQMVLDYVCERLRKELKHHPRI
EGENSHYCCVCEVEVFNILFVLPHEDKYIVYCLNCALKHEMDLKSFYVLNQYNMDELAAV
LDQFTLVGILFCLFNNLLSPYLEENWNDMLKFQISDFCLNQKPHPNCSCSFSVTWPQYSP
FSKGYCPFRCFHFCAVLLLICPIGTEDIGCRWRRAFVSSAKWESNIGRNRPNLSVPVSGL
VNSGQALH
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgcgttttttacatttcagcacagaatttggttgccttaatcttgtacacccagagaag
atatttgagaggcgattggcattaaagttttacgaacagagacttgaagaaattcaacgt
tcaaccgatgctgcggttgaaacggacaatcgatttctttgcgaagtattgctcaaattg
ggtcatctgaatctgttgattcatgattttgttaaagcattgtcagcctatcagcgtttt
tatgaatgcaaagcagaatattggaaggatgctccatttttatatggtctgggattagta
tattttcactttaatatccacaaaagcgccacggaagtttttcaacgtctcctttatcta
tttccaaatttttgcaaagcagcggaagtgaatattcgtttgggtttggctttcaaagcg
ttacacagttttgatttagcaatcaaaaatttgagactcgctttcgttgatccaaatccc
actatattttccaaagcagaaattcgttttcacatagctcactgtatagagttaaagggt
gatttgaaaaaagcacattctgaatatcagtcactgttgcaatcttctcaggtagtgtct
ccagtactgagagcatcattgttgcgccagttgggttggcttttttttcgtgaagaaagc
tttggtgataaagcacatcggataagcgtagctattaattgcttacagcagtctttgaaa
gcagatcctacatctggtcgaagtcattattacttaggaagatgcttctcagcagcagga
cgcgcccatgaggcattcctatcgtacagacattccatcgacaaaaatgaatccaacgct
gatatttggtgctcaattggagttctttaccaacaacagcagcaaccgtttgatgctttg
caagcatttgtatgtgcaattcagcttgatgattccttgtcgccggcgtggattgatctt
ggccttttgtacgagcaatattttcagctaaacgacgctttgaagtgttacaaaaatgct
ctcaaattgaaatccaaaattaatcaagccttgtttgatcgaattgaatttttggagaca
cagttgaaaggtagaaccaaagtttctgtggatggtgaaaacagcaagagtgcacctctg
ttacccaacattgaagatgtatcccgtttaccgattccggcacaacttctggatcgtcaa
aatggatatcaaagacaaagaattgacatgtatttgaaaggaagtttgatcggtattggt
ttgaatgagagtgaagatggcgctcttccttccctcaattcgcagcagatacagatgatg
catattttatcgcaaaatcaagctttattgaaccctcatcagatgttgactcttcgccag
ctgcaagaaacacacgcgcttactcaacattttcagcagcaaagggaacaacaacgagat
gaggaggacaatgtatcgagatctcaggagactgtgaacgtggatccaattacaagcact
gaaattggcatgcgcacatctcctttaagtgacttgccacaagttacccaagaagatttg
caagcttttctcggttttactgatcaagaagacttgacaaacagttgccttgagccagat
aatagaaataaagctcgtatagacaaaaatgaccctattataccgacaaatgtgctcttt
tctactcctgttacaattcaggactctgtgaattctgatagaccagcctttcttgctgaa
cctcctccgtcgtgtttgagtctcaccgcccctttaaacgtcccctgtagcatttctagt
aatgaaatattccagatatgtaagcagcgcaacttgggcagatgcaaatcagtatatgag
gagaatgtgttgcctcctcaaccaccgacgtgcaatagaaacttgcctaaagataagtta
ttactgacgactccatgtactgttgttgatacgaaaaaagatgcatcatcgttggaattg
caacgcttctgctatcaacagccaatcgttgtgattcgcggcttgacgtcagcgttgaaa
atggacctgagtcttttttccacaaaaaccatcgtagccgaagctgctaatcaacaagtg
gaattgcgtacccaatatttgcaagcatccgacgtgaatgtcgattcgcagggtaatgtg
acttggcagtgtggaagtcaaccgtcctatactacagtgggaaaatacgccgcttatcag
cttcagtctttccaaaatgcactgaaagatgataaagagaaaatgaaacgtgagggtgat
gtggaatgcaattcttcgaaacggaaaaaagatgtcgcactgaaaaaggtagtaaagttt
ggaacgaacgtagatttgtccgacgaacgaaagtggcatcttcaactcaaagaattgaac
aaattaccctccttttgtcgcgtttactctagctgcaatcttttgtcacatcttggtcac
gttgtgcttggtatgaacactgtacaactttatatgaaagtacccggcgctagaactcct
ggtcatcaagagaataacaattttgctggtgttaatattaacattggtcctggtgaatgc
gaatggtttgccgttccttacgaatactgggatgctgtaaagacaatttgcgaaaataat
aaatgtgattttctgcgcggttcatggtggccatcgttggaggatttgtatgaaaataat
ataccattataccgattcacgcaaaaagctggcgatgttgtttggataggagagggaact
gttcattgggtacattcaacaggctggtgtaataatattgcctggaatgttggtccattg
actgcgtcgcagtatcaactcgcaattgagcggtatgaattcaacaagttgaatagttac
aagtcgttggtgcctttgattcatctatcttggcaacttgctcgcaatatccgattcagc
gacaagacattattcgaaatggttcgaaaaacccttatccaatctattgcatattgtcag
atggttttggattatgtttgcgaacgactgagaaaagagttgaaacatcatccgcgtatc
gaaggagaaaattctcattattgctgtgtttgtgaggttgaagtatttaatattcttttt
gtattgccacatgaagataaatatattgtgtactgtttgaattgtgctttgaagcacgag
atggatttgaaatcattctacgtactcaaccaatacaatatggatgaacttgcggcagtt
ttggaccaatttacgttggttgggattttgttttgtctctttaataatttgttgtcgcct
tatttagaagaaaactggaatgatatgttgaagttccagatatctgatttttgtctcaat
caaaagcctcatcccaactgcagttgttcattcagtgttacctggccacagtattcgcca
ttttccaaaggttactgtcctttccgttgtttccatttctgcgcagttttgcttttgatc
tgtccaattggcacggaagatattggttgtcgttggcgccgtgcttttgtaagcagtgcc
aagtgggaaagtaatattggacgaaatcgacccaacctctcggtgcctgttagcggcttg
gtcaactcaggccaagcgttacactga

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