Trichinella spiralis: Tsp_04001
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Entry
Tsp_04001 CDS
T01609
Name
(RefSeq) isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Tsp_04001
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsp01007
]
Tsp_04001
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsp03016
]
Tsp_04001
Enzymes [BR:
tsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Tsp_04001
Amino acid related enzymes [BR:
tsp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Tsp_04001
Transfer RNA biogenesis [BR:
tsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Tsp_04001
Prokaryotic type
Other AARSs
Tsp_04001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Ubiquitin_IARS1
Motif
Other DBs
NCBI-GeneID:
10904256
NCBI-ProteinID:
XP_003374813
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
METLHESINFPLEEEKILQLWKKIDAFKTCQERSKGRPIFSFYDGPPFATGLPHYGHILA
GTIKDTITRFAYQSGFQVERRFGWDCHGLPVEYEIDKTLGLAGPQEIEKFGVSKYNAECR
AIVMRYAKEWQCIVERLGRWIDFENDYKTLYPSFMESVWWVFKQLYNKGLVYRGVKVMPF
STACGTPLSNFESGQNYKEVVDPAIIVTFPLDEDPSVSLLAWTTTPWTLPSNLALCVNAN
LDYVKIRERSSNRIFILMEARLNILYKSEEEYEIIERFHGQSLEGKKYKPLFEYFAHLKT
ECKAFSILCDGYVSAESGTGVVHQAPYFGEDDYRVCLFNHVITKEMNPICPVDSSGRFTK
EVTDFHGQYVKDADKGIIKMLKENGRLIQSSTVKHSYPFCWRSDTPLIYKAVPSWFVKVE
FMVEQLLANNEKTYWVPSFVKEKRFANWLQDARDWAISRNRFWGTPIPLWVSDDGEEVVC
VGSIEELQNLTGKKLEDLHREYVDVLTIESVTGRGILRRIPEVFDCWFESGSMPYAQKHF
PFENYGEFLRSFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNLIVNGLVLAADGSK
MSKRKKNYPDPMDIVNKYGADVLRLYLINSPVVRGEFLKFREEGVRDLLKDVFLPWYNAY
RFFFQNVSLYEMKHGKRFTAKLITPTNIMDRWILSFTYNLVAFVKEEMKAYRLYTVVPRL
VKYVNMLTNWYVRMNRKRLKGGFGEEESLIALETLCQALLLLVRLMASFTPFITEMMWQR
LKAVLDPLAELKPEDSIHYVKIPDVDRSMIDEDVENHVITMQSVVEVARVIRDRHALPTK
YPIKEVVLVHHDLRVLDMAQNMRNYILDEVNARSMMVSVDKAKWGIRSAVDVNLKLLGAR
LKKDLKPVMDALKAISADDICSMMELGPINILGYEIFREELQIKYVLGDTDVKDYQAHSD
GRLIVLLNVSRDESMHEEGLAREMVNRIQKLRKKAKLLPQDDVMIKCELVSGGDSSKVYS
SLCRWREFMEQSLKQPIVFLESPQTESDHLLIIKENVTVKGCVICVCIFSRSAKPSQQSS
QLFCPYVDVVDSSGRCVRILLENPVGSGMITMCRLRNEAS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctgcacgaaagtataaattttccgctagaagaagagaagattcttcagctg
tggaaaaaaatagacgctttcaaaacttgtcaagagcgtagcaaaggcagaccaatattt
tcgttttacgatggcccaccatttgctacagggcttcctcattatggtcatattttggca
ggcaccataaaagatacgattacccgctttgcttatcaatctggttttcaagttgaacgc
cgttttggttgggattgtcacggccttcctgtggaatatgaaattgacaagacattggga
ttagcgggacctcaagaaattgaaaagtttggtgtttccaaatataatgccgagtgtcgc
gcgattgttatgcgatacgctaaagagtggcaatgcattgtggaacggcttggtcgatgg
atagattttgaaaatgactataaaactttatatccaagtttcatggaatctgtatggtgg
gtattcaaacagctgtataacaaaggtcttgtctacagaggtgtaaaagtgatgccattt
tctactgcttgcgggactccattgtcaaattttgaatctggacaaaattacaaagaagtc
gttgatcctgctattattgtaacttttccgcttgatgaagatccatccgtgtcactgtta
gcttggacaaccacaccttggacactgccaagtaatttggcgctgtgcgttaatgcgaac
ttggattatgtaaaaatcagagaacgaagttctaatcgaatattcatattgatggaagct
cgattgaacatcttatacaagtcagaagaagagtacgaaataattgaacgttttcatggt
cagtcgttggaagggaaaaaatataagccgttgtttgaatattttgcccatttaaaaacg
gaatgtaaagcattttccatactttgtgatggatatgtatcagctgaaagtggtacgggt
gtggtgcaccaagcaccttattttggtgaagatgactatagagtttgtctgtttaatcat
gtcattacaaaggaaatgaatcctatttgtcctgtagacagcagtggacgttttacgaaa
gaagtcaccgatttccatggccaatacgtcaaggatgcagacaaaggtattatcaaaatg
ttgaaagaaaatggacgattgattcagtcaagtacggtgaagcattcatatccattttgt
tggcgctctgatactccgttaatttacaaggcggttccatcgtggtttgttaaagtggaa
tttatggttgaacaacttttagctaacaacgaaaagacatattgggttcctagttttgtg
aaagaaaaacgatttgcaaattggttacaagatgctcgcgactgggcaattagcagaaat
cgcttttggggaacgccgatcccgttgtgggttagtgatgacggtgaagaggtggtttgc
gttggttctatagaagaactgcagaatttgactggaaaaaaattggaagatttgcatcga
gaatacgttgacgtgctgactattgaatccgtcactggacgaggcattttacgtcgtata
ccagaagtttttgactgttggttcgagtctggctcaatgccttacgcacagaagcatttt
ccttttgaaaattatggtgaatttttgcgcagttttccagctgattttattgcagaaggc
attgatcagactcgagggtggttttacactttgttggtactctcgacagccttatttggt
aagcctccgtttaaaaatttaattgtgaacggtctggtattggctgctgatggttcgaag
atgagtaaacggaaaaagaactaccccgatccgatggatattgtaaataaatacggtgca
gatgtgcttcggctttatttgatcaattcaccagtagtacgaggcgagtttctgaaattt
cgagaagagggtgtgagggacctcttgaaggatgttttcttaccatggtacaacgcttat
cgattttttttccagaatgtatctctttatgagatgaagcatggaaaacgattcacagcc
aaattaattacaccaacgaatattatggatcgatggatattgtcgtttacctacaatttg
gtagcatttgttaaagaagaaatgaaagcatatcgattgtatactgttgtgccgagactt
gtcaaatacgtcaacatgttgaccaattggtatgtgcggatgaacagaaagcgcttaaag
ggtggttttggagaagaggaaagtttgattgctttagaaacattatgccaagcattgttg
ctgttggtacgtttgatggcttcgtttacgcctttcattactgaaatgatgtggcagcga
ctgaaagctgttttggatcctcttgcagaattgaagcctgaagattcaatacattatgtg
aaaatacctgatgttgatcgttcgatgattgatgaagatgttgaaaatcacgtaattaca
atgcaaagtgtggtggaagttgccagagtaatacgtgatcggcatgcattacctacaaaa
tatccaatcaaggaggtagtgttggttcatcatgatctgagggttctggatatggcacaa
aatatgcgcaactacattttggacgaagtgaatgcacgttcaatgatggtatcggttgat
aaagcaaaatggggcatacgcagtgctgtggatgtaaatttgaagcttttgggtgctcgt
ttgaagaaggatttgaagccagtaatggatgcacttaaagctatatctgcagatgatata
tgcagtatgatggaactggggccaataaatattttgggatatgaaatttttcgcgaagaa
ttgcaaatcaaatacgtactaggcgacactgacgtgaaagattatcaagcacacagcgat
gggcgacttattgttttgctgaatgttagtcgagatgaaagcatgcatgaagaaggttta
gcaagggaaatggtgaatcgcattcagaagcttcgtaagaaggcgaagctgcttccacaa
gatgatgtgatgattaagtgtgagctcgtaagtggaggagactcttcaaaagtgtattca
agtctctgtcggtggcgcgaatttatggaacagagtttaaaacagcctattgtttttctc
gaatcacctcaaacagaatcagatcatttactgataatcaaagaaaatgtcaccgtgaaa
ggttgtgtcatttgtgtttgcatattttcaagaagtgcaaaaccttctcagcagtcatca
caactcttttgcccttacgttgatgtggtagattcatcaggacgatgtgttcgtatattg
ctggagaatccagttggaagtggaatgatcacaatgtgtagacttcgaaacgaggcaagt
tga
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