Trichinella spiralis: Tsp_04190 Help Entry Tsp_04190         CDS       T01609                                  Name (RefSeq) hypothetical protein   KO K19656   intraflagellar transport protein 122 Organism tsp  Trichinella spiralis Brite KEGG Orthology (KO) [BR:tsp00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:tsp03037]     Tsp_04190 Cilium and associated proteins [BR:tsp03037]  Primary cilia and associated proteins   Intraflagellar transport (IFT) complex A    Tsp_04190 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_IFT122_2nd Beta-prop_IFT122_1st WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 EIF3I Zn_ribbon_IFT122_C TPR_IF140-IFT172 NBCH_WD40 WD40_MABP1-WDR62_2nd WDR55 Zn_ribbon_IFT122 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 TPR_GEMI5 Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EML TPR_IFT80_172 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd B-prop_COPA_B_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_2nd FANCL_C TPR_COPA_B Mad3_BUB1_I TPR_ELP1 Clathrin Motif Other DBs NCBI-GeneID:  10904776 NCBI-ProteinID:  XP_003375006 LinkDB All DBs Position Unknown AA seq 1154 aa AA seqDB search MATRDGQVEKLSSVGGRFSQFRRWLYFCHNHNQKLWCRTVDEAGGQKSGRINDLTFKPDG SELLVAAGLNIFVYDVHDGNLIQTLHGHRDTVHCVVYSPSGEKFASGSADKSVIVWTDKH EGMLKFNHSDSIQCLTFCPINCILLSCAISDFGLWTLEKKTVDKHKSSARICSCSWASNG EYFALGLYNGIVSFCNKMGDEMLKVNRTNGCPVWNLAFNPFRPEEFLNESENETMDIALA VLDWSSAIAFYDINGQKMLEDVKLNYDPLCLDYLAPGEFMAISGSNRKVNLHTRTGTYLF TVAEMKSWVWVCRAKPDSHHIAVGCEDGTVAIYQLRLGTVHGLYDDRYAYRDNITDVVVQ HLTDGSKVRVNCQDLVKKVAVYKDKIAVQLSNRICIYECRMKSSSGMEYSKTQAIAKDFE CSLLVLCSKYVVLCMDGILQSCTLSGYVERQWVLDSMIRYIKVVDGTADHESLLVGLKNG QVLKIFLDNPFPVELMKHNDGIRCLDLSIYQTKLAMVGENGICFVYDLITEELLFQESQI TSVACNRQHEDIICMSGANTILVRIKDFPAYELQMPGLVVGFSGSQVFCLYLYAMTTIEV PLSFQIQQCIDRKLFSLAYSVACLGAHSSEWEHLGLCALQSLEYDLAKKAFQRTKNFKYL NLIDRLQRISDDDVAMAMMFACTGKIEEAANLFQKCGYTQMAVEMYLDLHMFEKTNELIG AIGAEGKQNLISKQALLAYHAKDFDKACEMYLAANDFEKAITIMDEQKWIEKLAALGKQL DETNYNLLNKIAKAFEKYKEYTLASEVYGKIRDVESWIRVKIFDNHWEEAFQIVKQHPEF EQNLYVEYANWLIKNQKFEEAQIAYCRAGLQEQALDVLVNLADVAIDENRFKDASYFYWL LSMQYLSSYVKDFQEEPFTFLSADTLFNVARCLLNSLQLCHPKKISKIKILYTLAKQAKQ LGAFRLGRIVCDQLGHLNLPPSMQTEVDLLTLSLKAKPFQDPEDLLPVCYVCSMGNPILS RDGGNKCVHCESLPLIEFEIEGGITRKEFQSLLQCNASSQEEIALLQSKKVKNGKVVYRR ADISALKSNEVFMCRRTDPSKDIYYRNLMPEIAISQCHSCNKFFHTDDWEFFILRYGHCP FCRKKLNLNDDWDD NT seq 3465 nt NT seq  +upstreamnt  +downstreamnt atggcaaccagagatggacaagtggaaaaattgtcgtctgtaggcggcagattttcacaa tttcgacgttggctatatttttgtcataatcataatcaaaaattgtggtgtcgaactgtc gacgaagcgggtggacaaaaatcgggccgaattaatgatctgacgttcaagccggatgga agcgaacttctggttgcggccgggttgaacattttcgtctacgacgtccacgacggcaat ctcattcaaacgttgcacggtcatcgtgatactgtacactgcgtcgtctattcgccgagt ggtgaaaaatttgccagcggttcggcggataaaagtgttatcgtatggaccgacaagcac gaaggaatgctcaaattcaatcacagtgacagtattcaatgtttgacgttttgtccgatc aattgtattctactgagctgtgctatcagtgactttggtctgtggactttggaaaagaaa actgtcgataagcacaaatcgtcggccagaatttgtagttgttcttgggcatccaatgga gaatactttgctctcggcttgtacaacggtattgtcagcttttgcaacaagatgggcgat gaaatgctcaaagtgaaccgcacaaatggttgtccagtttggaatttggcattcaatcca ttcagaccggaagaatttttgaacgaatcagaaaatgaaacaatggatattgcactggct gttttggactggtcatcggccatcgcattttatgatataaatggacaaaagatgttggaa gatgtgaaattaaattatgatccactctgtttggactatttggcacctggtgaatttatg gccatttcaggttcgaatcgcaaagtgaatttgcatacacgaacgggaacctatttgttt accgttgctgaaatgaaatcatgggtttgggtatgccgagccaaaccggacagtcatcat attgctgtgggctgtgaagacggtactgtagctatttatcaactcaggcttggcactgtt catggattgtatgatgatcgatatgcatacagagacaacatcactgacgttgtggtacaa catttaacagacggaagtaaagtacgtgtgaattgtcaagatttggtgaaaaaagtggcc gtttataaagataaaattgcggttcaactttcgaatagaatctgcatttatgaatgtaga atgaaatcaagttcgggtatggaatattcgaaaacgcaagcaattgcaaaagatttcgaa tgcagccttttggtattgtgctccaaatatgtcgtattgtgcatggatggcattttgcaa agctgtacactttctggatatgtggaacgtcagtgggttttggattccatgatacgttat attaaagtggtggatggtacggctgatcatgaaagtttgttggttggtctgaaaaatggt caagtgttgaaaatatttttggacaatccatttcctgttgaactgatgaaacacaacgat ggaatccgatgcctggatctgagcatttatcagaccaagttggcgatggtcggtgagaat ggcatatgtttcgtttatgacttgatcacggaagaacttttatttcaagagtcgcaaatt acaagtgttgcttgcaatcgtcaacatgaagatataatttgcatgtcaggagcaaatacg attttggttcgaataaaagattttccagcttatgagcttcaaatgccaggtttggttgtc ggcttttcaggttcgcaagtgttttgtttatatctttacgcaatgacaacaatagaagtt ccgctgagttttcaaattcagcagtgcattgatcgaaaattgttttcattggcttattcg gttgcttgccttggcgcgcattcatccgaatgggaacatcttggcctgtgcgctttgcaa agtttagagtacgatttagctaaaaaagcatttcaacgaacgaaaaatttcaaatattta aatcttattgatagacttcaaagaattagcgatgatgatgttgcaatggcaatgatgttt gcatgtactgggaaaattgaagaagcggcaaatttgttccaaaagtgtggatatacccag atggcggtggaaatgtatttagatttgcacatgtttgaaaaaacgaatgaacttattggt gccatcggagctgaagggaagcaaaatttgatcagcaaacaagcgctgctagcttatcat gccaaggattttgataaggcttgtgaaatgtacttggcagctaatgattttgaaaaagcg atcactattatggatgaacaaaaatggatcgaaaaattagctgcacttggcaagcagttg gatgaaacgaactataatttgttgaacaaaattgcgaaagcgtttgaaaaatacaaagaa tatacactagccagtgaagtatatggtaaaatacgtgatgtggaaagttggatacgtgtt aaaatttttgataatcattgggaagaagcttttcaaatagtgaaacagcacccagaattt gagcaaaatttgtacgtagaatatgcaaattggcttataaaaaatcaaaaatttgaagaa gcacaaattgcttattgtcgggcaggtcttcaagagcaagctcttgatgtattggtgaac ttggctgacgtggcaattgatgagaatcgtttcaaagatgcgtcttatttttactggtta ttaagcatgcagtatctttcttcatatgttaaggattttcaagaagaaccatttacattt ttgtctgctgatactttgttcaacgtggctcgctgtttgttgaattctcttcaactctgt catccgaagaaaatttccaaaataaaaatactttacactttggccaagcaagcgaaacag ttgggcgcgttccgacttggtcgaattgtctgcgaccagcttgggcatctcaatctgccg ccgtccatgcaaaccgaagtggacttgttgacgttgtcgttgaaagcgaaaccgtttcaa gatcccgaagatttgctgccagtttgttatgtctgttcaatgggaaatccaattttgagt cgagacggtgggaacaagtgcgtgcattgtgaatctctccctttgatagaatttgaaatt gaaggtggtataacaagaaaagaattccaaagtctgttgcaatgcaacgcatcgtcgcaa gaggaaattgctctactacaatccaaaaaagtcaaaaatggaaaggttgtttatcgccga gcagatatcagcgcgttgaaaagcaacgaagtgttcatgtgtcgtcgaactgacccgtcg aaagacatctattacagaaatttgatgcccgagattgccatcagtcagtgtcattcttgt aacaagttttttcacacagatgattgggaattttttattttacgctacgggcattgcccg ttttgtcgaaagaagttgaacttgaatgacgattgggatgattga

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