Trichinella spiralis: Tsp_08057
Help
Entry
Tsp_08057 CDS
T01609
Name
(RefSeq) pleckstrin domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
tsp
Trichinella spiralis
Pathway
tsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
Tsp_08057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_08057
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsp04990
]
Tsp_08057
Membrane trafficking [BR:
tsp04131
]
SNARE
SNARE associated proteins
Others
Tsp_08057
Domain-containing proteins not elsewhere classified [BR:
tsp04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
Tsp_08057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
10906614
NCBI-ProteinID:
XP_003373459
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MDSKRTLYYELCSSVKAALREKHSDAEMNYLNNETTNHLCCVIEALFIHGLRPKYVIRNS
HRKYPEPNFWPFISKYLHRNVRAQIKNLNQINTDIGRSRVIIIEHCINLISIAFLCYISC
RFGHYYADDALIRDEKLRDSISHHLRALMKFSFNLALNSSLLNIWIPSPLKLAGLLVDGG
STIRQISADDGDPERQNTIEHCSLEEDNSDDLSLDHTCTMDDLYSASAVSSLTTSAALLS
GMSSDEFLLGFSQFGDKIMSKLEPAFTAFSDSQRNGNVLNCKTPNVSVSYIEVSLPENGK
TDQSPVVEFELSPTKEDSLDPNSVEWYVAENDCSSSYTGEIGDGALADLQADFHQIGFES
CEAEPFVIERPDQASCEASYLVPNPDDVFEIFEIHPADAQKPPLNEYCIMSTGSEEKQKL
CASFDIPGSLNDSSASDAWKFLNLAVREQNKWQYACLTKIATEKGLDVQSGKCHSCARCI
GFTNEPFKVCNFDGYYYCSACHVDDTMLIPARALLNWDFTPRKVSIYDQPIFHMNEINPA
LLVKSKALSQLHDLRLELNYIAAYLLTCRKSVAEELSKRLWPKDYLFKVIDLYSLVDLEQ
TASGKLHKLLKPVFEYAVNHVLHSCRLCSQKGFICEICNSADVIYPFELQKAFRCPKCAW
VFHKACMEGKSCTKCLRREALAVNANANSIDLSSTLPFDDL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaaacgtactctttattatgaactgtgtagttctgtaaaagcagctctgcgc
gagaaacattcagatgcagagatgaattatttgaataatgaaactacaaatcacttgtgt
tgcgttattgaagcactatttatacacgggctgcggcctaaatacgtcattcggaattct
catcgaaaatatccagagcctaatttttggccttttatttcaaaatatttgcatcggaac
gttcgtgcccaaatcaagaatctgaatcaaataaacactgacattggaagatctagagta
attatcattgagcactgtataaatttgatttcaattgcctttctttgttatatttcttgt
aggtttggacattattacgccgatgatgcgttgattcgtgacgaaaagctgcgtgattca
atcagtcaccatttgcgtgcgctgatgaaattcagcttcaatttggcattgaacagcagt
cttctaaatatttggattccatcgccgctgaagttagccggtctgttagtcgacggtggc
tctactatacgccaaatcagcgccgacgacggtgatcctgagcgtcagaatacgatagaa
cattgttcgttagaagaagacaattcggacgacttgagcttggaccatacttgcacaatg
gacgacttgtacagtgcgtcggcagtgtccagtttgaccacaagtgctgcgcttctgagt
ggtatgtcgtcggatgaatttttgctcggtttttctcagtttggcgacaagatcatgtcg
aaattggaaccggcgtttactgctttcagcgatagccaacgcaacgggaacgtgcttaac
tgtaaaacgccgaacgtgtccgtctcatatatagaagtgtcattgccggaaaatggaaaa
actgaccaaagcccggtggtcgaatttgagctgtcaccgaccaaagaagacagcttggat
ccgaatagtgttgaatggtatgtggcggagaacgactgctcatcatcttatacaggcgaa
attggtgatggggcactggccgatttgcaagctgactttcatcagattggctttgagtct
tgcgaagccgagccgtttgtgattgaacgtccggaccaagcttcctgcgaagcatcctac
ctggtgcccaatccagacgatgtattcgaaatttttgaaattcatcctgcagatgcgcaa
aagccgcctttaaatgaatactgcatcatgagtactggatcagaagaaaaacagaagtta
tgcgccagttttgacatcccgggatcgttgaacgattcatctgcatccgatgcatggaaa
tttctcaatttggctgtcagagagcaaaataaatggcaatacgcatgtttgacaaaaatt
gctaccgagaagggtttggacgtgcagtctggaaaatgccacagttgcgcaagatgcatc
ggttttacaaacgaaccattcaaggtatgcaattttgatggttattattactgcagtgct
tgccatgttgatgataccatgctcatacccgctcgtgctctgcttaactgggattttacg
cccaggaaagtcagcatttatgaccagcctattttccacatgaacgaaatcaatccggca
ttgttggtgaagtcaaaagcattatcccagttgcatgatcttcgactggaattgaattac
atagcagcttacttgctaacatgccgaaaatcggtagcagaagagttgagcaaacgttta
tggcctaaagattatctcttcaaagttatcgatttgtattcacttgttgatttggagcaa
acagcttctggcaagctgcataaattattgaaaccggtctttgaatacgcagttaatcat
gttttgcattcttgtcgactgtgttctcagaaaggattcatctgtgaaatatgcaacagt
gcagatgttatttatccatttgaattacaaaaagcatttcggtgcccgaagtgtgcttgg
gtatttcacaaagcctgcatggaaggaaagtcgtgtacaaaatgtttaagacgagaagcg
ttggctgtaaacgcaaatgctaactcaatcgacttgagcagcacccttccattcgatgat
ctctaa
DBGET
integrated database retrieval system
