Trichinella spiralis: Tsp_08530
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Entry
Tsp_08530 CDS
T01609
Name
(RefSeq) putative PHD finger protein
KO
K09189
[histone H3]-lysine4 N-trimethyltransferase MLL5 [EC:
2.1.1.354
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00310
Lysine degradation
tsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
Tsp_08530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_08530
Enzymes [BR:
tsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
Tsp_08530
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
Tsp_08530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_5
PHD
SET
PHD_2
Motif
Other DBs
NCBI-GeneID:
10904593
NCBI-ProteinID:
XP_003375544
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MRGLSLHEVLGSVFGRKEYTLNMVNMNSLNGAHQLIPPVRAPDTVFSQKPGELLWRSELH
TYSNSQKSDNSRPIRSPKVLQKLPFSHLESTTAAKSLPAHIPTVTRLSSDGSAQVAFSDS
TPKAFKAANKSATFAPCRLRTFPDSRAGLPFDSGVLSFPEVGSPSSFNLAEFFPNDNSSL
ISGFCKKLSSSSFGFPRTFPGIGRELKQPTAAEQPAGNVGKVADFFKSNISEPLNKVHQQ
QHQQQQQQQQQQQQQRFTPILGDRFLPLLQMKSSNKMVPKAKPASPLGDLVKRSKCHSEG
NSYANSFKRPADSASDEERQSNIPVKVEKLETVESNNGDVDDGDLGENFFGEFQPRALEK
PIEKPLRRNTISSGKSEPHWEGEDYTTRCFCGMTHNDEFMVQCDKCEVWQHCDCVGLEMS
RIPENYLCELCDPRTLPLSLEEAKLIQMKKLKQRARNRTRKGSGGGGSWGCRGRPKREND
SAELSLDQWLDSLTDTQGAKKILDLLPSESLCKAMFVAVQTHGLVALKKISSGQPIAECI
LKPHLARDKQDILANGVVSSPWLLFQDLKVNGSTGPVDLCVDASDTDFAHLRRSCHPNSQ
IHTVVHNGQLRFVLVAAADISEMVEITIPFDYDYTKSSVPVTCSCFSIHPTLRSKPCLVD
GFKKRAGSKGKLAQQHINDKEENKGKGKLNAASGGGKGCAAAKAGVKKPTQRKAKREKLK
LRWRFDTNLIRRNNVEEKDKSSVDSTTTVKHTGEGNADVDSRDVVGRGVGAADAEAVADD
EAEPVTSSARSKPAAAAAFDEPNQQQQGRQKQRNESKAKRGSIELARLRKDYWYSRQVEE
TSGESGAGGVDWTLPNERTKTSTREERKMQSIMKYIHWMEEQEKKLQRKRGSQQAADRRP
EKKQPRRRSLGDVALLNRTKQVEAAKPDDDRGADSAFDGGDLGESTKVVNILDNLHQPNS
EHAKDSVGELIEKVVEQQADLMSNMNNDKVRHVFQQKTDLQIHREQCTNDNNNNNNDSKL
SIVQQRFPWDKSLLLTAAAAALNSSKTTEEARQKMINIETLNQIGNSGYSRSEFHANAAA
LPKRKLSLDEYKHRKQINEGDVSDNKEHNTPPPPPSPLPPPPSLLEKPKSFFPDMSCKHW
DDMLKSLALHFNNPVGGGVPTLPVERSTLPDLTTPAIPCSLETSDNLNLSANEDQNGTFE
MQTANASNTNFDQNRKDKYQDICNVQLVVLPMKSTGNNEEKKASPSLSEEDHKAVEKNNL
ANIYRQFNEWKKSPMLFIDDVVPAKVSRQEQTCSVDMSLVVNNNDSNGGYSCSVGKKKKA
TGASSTVVSAVVEQCASAAVEGRGGDLDGNFELNEGECIERQRQQ
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtttgagtctgcatgaagtgcttggtagtgtttttggaaggaaagaatatact
ctgaacatggtgaacatgaactcgttaaatggtgcacatcaattaattcctcctgttaga
gctccggatactgtattttcacaaaaacccggcgaactgttatggagaagtgaacttcac
acttattcaaacagccagaagtcagataattctagaccgattagaagtccaaaggttttg
cagaaattaccttttagtcatttggaatcgacgacggcggcaaaatctttgccggcccac
attccaacagttacacgactgtcatctgacggcagtgctcaggtggcattttcagactcc
acgccgaaggctttcaaagcagctaacaaaagcgccacttttgcgccgtgccgtttgcga
acttttcccgacagtcgcgctggtctgccatttgacagcggtgtgctatcttttcccgaa
gttggcagtccaagtagttttaatttagcagaattttttcccaacgacaacagttcactc
atctccggtttttgtaaaaagctgtcttcgtcatcgtttggctttccacgaacttttccc
ggaattggtcgtgaactgaagcagccaactgctgctgaacagccagcaggaaatgttgga
aaagttgcagattttttcaaatccaatattagcgaacccttgaataaagttcatcaacaa
cagcatcaacaacaacagcaacaacaacagcagcagcagcagcagcgttttacgccaatt
ttgggcgacagattcttaccattgttgcaaatgaagtcgagtaataaaatggtccccaaa
gcgaaacccgcctctcctttgggcgatttggtgaaacggtcgaaatgccacagcgaaggc
aacagttatgcaaatagcttcaaacggccggccgattctgcatcggatgaagagcggcag
tcaaatataccggtgaaagtggaaaagttggaaacggtcgaatcgaacaacggtgacgtt
gatgacggtgatttgggtgaaaattttttcggcgaatttcagccgagggcgttggaaaag
ccgatcgagaagcctttgcgccggaacaccatttcaagcggtaaaagtgaaccccactgg
gaaggcgaagattacacaacgcgctgcttttgcggaatgactcacaacgacgagttcatg
gtccagtgcgacaagtgcgaggtgtggcagcactgcgactgcgtcggtttggaaatgtcc
cgcataccggaaaattatctctgcgagctgtgcgatccgaggacgttgcctttgagtttg
gaagaagcgaaattgatacagatgaagaaattgaagcaacgtgctcggaatcgaactcgc
aaaggtagcggcggcggcgggagctggggctgtcgtgggcgaccgaaaagggaaaacgac
tctgccgaactcagcttggaccagtggctcgattccctcactgatacgcagggtgcgaaa
aagatactggacttgctgccgtctgaaagtttgtgcaaggcgatgttcgtggccgttcag
acgcacggtttggtcgcgttgaagaagatttcgtccggtcaaccgattgccgaatgcatc
ctcaagcctcatttggctcgggataagcaggatattttggccaacggagtggtgtcgtcg
ccgtggcttttgttccaagatttgaaagtgaacggctccactgggccggttgatttgtgc
gtcgacgcttcggacacggattttgcccatttacgtcgatcatgtcatcccaatagtcaa
attcacacggttgttcacaacggacaactgcgttttgtactcgttgctgcggctgacatt
tctgaaatggttgaaattaccataccattcgattacgattataccaagagttcggttcct
gttacgtgtagctgtttttcgattcatccgactttacgttcaaagccttgtctggtggac
ggttttaaaaagcgtgctggctcgaaaggtaaactcgcacagcagcatattaacgacaaa
gaggaaaataagggcaaagggaaattgaacgcagcatccggtggtggcaagggttgtgca
gcggcaaaagccggcgtgaaaaagccgacgcaacgtaaagcgaaaagggaaaaattgaaa
ttgcgttggcgtttcgacacgaatctgattcgtcgaaacaatgttgaagagaaagacaaa
agcagcgtcgacagtacgacaacggtgaaacatacgggcgaaggcaatgccgacgtggac
agtagggatgttgtcggcaggggggtcggtgctgctgatgcggaagcggttgccgacgat
gaagctgaaccggtgacgtcgtcggctcggtcgaagccggcagcagcagcagcattcgac
gagccgaaccagcagcagcagggtcgacaaaagcagagaaatgagtcgaaggcgaaacga
ggtagcatcgagctggcacgtctccgcaaagactactggtattccaggcaggtcgaggag
actagcggcgagtctggtgccggcggggtcgactggactttgccgaacgagaggacgaaa
acgtcgacccgggaagagaggaaaatgcagtcgataatgaagtacatccactggatggaa
gagcaggagaagaagttgcaacggaaacgtggttctcagcaagcggccgaccgtcgaccg
gagaaaaagcaaccgcgtcgtcgaagcttgggtgacgtggcgttgttgaatcgaacaaaa
caagtggaagctgcaaagccggacgacgaccgtggtgcagattctgcatttgacggcggc
gacttgggcgagtcgacgaaagtggtgaacattttggacaatctccaccagccgaactcg
gaacacgcgaaagatagtgttggtgaattgattgaaaaagttgtcgaacagcaagctgat
ctgatgtcgaatatgaacaacgacaaggtgaggcacgttttccagcaaaagaccgacttg
caaattcatcgtgaacaatgtacaaatgataataataataataataatgacagtaaatta
agtattgttcaacaacgatttccgtgggataaaagtttgctgttaacagcagcagcagca
gcgcttaatagtagtaaaacgacagaagaggcacgtcaaaagatgattaatattgaaacg
ttgaatcagattggtaacagtgggtattcgagaagcgaatttcacgccaacgctgctgct
ttaccgaaaaggaagctctctttggacgagtataagcatcgaaagcagatcaacgagggc
gatgtcagtgataacaaagaacacaacacaccaccacccccaccctcaccactaccacca
cccccatcattgttggagaaaccgaaatcattttttccggatatgagctgtaagcattgg
gatgacatgctgaaatcgttggcgttgcatttcaacaacccggttggcggcggcgtaccg
actttgcctgttgaaagatctactcttcctgatttgaccacacctgcaattccttgcagt
ttggaaacatctgataatttgaacttgtcagcgaatgaagatcagaatggcacctttgaa
atgcagacggcgaatgcatcgaacacaaattttgaccaaaacagaaaggacaaatatcag
gatatctgtaatgtgcagttggttgtacttccgatgaaaagtacgggaaataatgaagaa
aaaaaagcttcaccatcgttatcagaagaagatcataaagcggtggaaaagaataatttg
gctaatatttatcgtcagttcaatgaatggaaaaaatcacccatgttgtttattgacgat
gttgttccagcaaaagtttcccgacaagagcagacatgctccgttgatatgagcctagtg
gtgaacaacaacgacagtaacggtggttacagctgcagcgttggcaagaagaaaaaagcg
actggtgcatcttcaacggtggtatctgctgttgtagaacagtgcgcatccgctgctgtt
gagggaagaggaggggatttggatggcaatttcgaattgaacgaaggggaatgcattgaa
cggcagcggcagcagtag
DBGET
integrated database retrieval system
