KEGG   Trichinella spiralis: Tsp_08631
Entry
Tsp_08631         CDS       T01609                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
tsp  Trichinella spiralis
Pathway
tsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Tsp_08631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_08631
   03041 Spliceosome [BR:tsp03041]
    Tsp_08631
   03032 DNA replication proteins [BR:tsp03032]
    Tsp_08631
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     Tsp_08631
Spliceosome [BR:tsp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    Tsp_08631
  U2 snRNP components
    Tsp_08631
 Complex B
  U1 snRNP components
    Tsp_08631
  U4/U6.U5 tri-snRNP components
    Tsp_08631
 Complex C
  U2 snRNP components
    Tsp_08631
DNA replication proteins [BR:tsp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     Tsp_08631
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 10907067
NCBI-ProteinID: XP_003373905
UniProt: E5SMS1
LinkDB
Position
Unknown
AA seq 199 aa
MISYCKLPDEKTGGKNHKMIGHLNYRMKIVLQDSRILVGYLKAFDKYLNIVLSECEEFRR
YRPKAGRTVDREEKRTLGFVLLRGEHIVSMSVEGPPLKEDDVPQIPKCGGIPGPGMAKPV
GRGMPFVPMPGMAPGLQGPIRGVGGPAPAMMQPQYGMPGTPVPGMAPPRLPGTPMPVRQP
GFVSTPVVRGPPPPPPPPA
NT seq 600 nt   +upstreamnt  +downstreamnt
atgatctcctactgtaagctacctgacgaaaagactggtggaaaaaatcataagatgatt
gggcatctgaattatcggatgaaaattgttttgcaagattcacgaattctcgtaggatat
ttgaaagcattcgacaagtatttgaatattgtattgtctgagtgcgaagaatttcgtcgc
tatcgaccgaaagcgggacgaaccgttgatcgcgaagaaaaacgcactcttggatttgtt
ttacttcgcggcgagcacattgttagcatgtccgttgaaggtccacctttaaaagaggac
gatgttccacaaattcccaagtgcggtggtatccctggacctggaatggcaaagcctgtc
ggtcgcggaatgccattcgttccaatgcctggaatggcaccaggcttacaagggccaatc
agaggtgttggtggacctgctccagcgatgatgcagccgcagtatggcatgcccggaact
ccagttccgggaatggctccaccacgtcttcccgggacaccgatgcctgtacgtcaaccg
ggttttgtttctactcctgtagtgcgaggcccacctccgcctccaccaccgccagcttga

DBGET integrated database retrieval system