Telmatocola sphagniphila: KIH39_14310
Help
Entry
KIH39_14310 CDS
T07229
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
tsph
Telmatocola sphagniphila
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsph02000
]
KIH39_14310
01504 Antimicrobial resistance genes [BR:
tsph01504
]
KIH39_14310
Transporters [BR:
tsph02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KIH39_14310
Antimicrobial resistance genes [BR:
tsph01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
KIH39_14310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QVL30038
UniProt:
A0A8E6EW00
LinkDB
All DBs
Position
complement(3620930..3624256)
Genome browser
AA seq
1108 aa
AA seq
DB search
MFVRFFIDRPIFATVLSIVISIAGALAVPTLPLSQYPPVTPPTIQIDCNYPGASAQVVAE
TIAAPIEQQVNGVERMLYMTSQSTSDGSYTCTVTFDIGTRLNFAQVLVQNRVNLALPNLP
DVVKATGVTTRKRSPEILLTVSLNSPDQSYNQLYLSNYAFIRIKDELARLPGISDVTLFG
QRDYAMRVWIDNDKLASRNLTAIDVVNALQEQNAQVAAGQIGQPPNPGLQTTQLTLSTLG
RLKTPEQFGEVIIKATSEGKVVKLRDVARLELGAKNEDVSNTFDHKQTIGLAVFLLTGAN
ALETGDLVKEAMERMAKDFPEGMIYEIGYDTTPFIRESINEVFKALRDAILLVAIVVLVF
LQSWRASIIPLAAVPVAIIGTFGAMWLFGYSLNNLTLFGLVLAVGIVVDDAIVVVEAVQH
HIERGLAPKAATIRAMEEVTGPVIAVGVVLAAVFVPCMFLSGVVGQFFRQFAITIAVSTL
ISTFNSLTLSPALAALLLRSPDSKPDPITCVINFFFGWFFKIFNWAFHKLGVGYVRTVSA
AIRVPALALFLYGGMIALGGMELQGLSSFLPKSYIPKFVSAKEAGLPTGFIPMQDKGYLI
ASVQLPDSSAAERSKKILDRVAEIALETPGVKHVNAVAGNSFVLSAYGSNFGSMFIILDQ
FANRKGKPDLYADVIMARLRQRVTSEIPEAQIAIFGAPPVSGLGRAGGFRVMIEDRGGNG
PKVLERETLNMISKGNQQPGLTGLFTVYATNSPQLFLDVDRTACMARGLDLNSVFGTLQA
TMGAQYVNDFNLFGRTWQVNVQSEQQLRSKVEDVGHIKVRNRNGDMIPLGAVVKVVPAAG
PLVITRHNMYPAAPINGNVAPGYSTGEAYSMFTALANQELQGSMAFEWSELAFIEQKSAS
SALKIFGLSVIFVFLALAALYESWMLPLAVILVVPVCVVGSLVAVDVANQDVNIFTQVGF
VVLVGLACKNAILIVEFAKLSRERGKSRRQAVLDACYLRFRPILMTSVAFILGVLPLLIS
TGAGAEMRKALGTAVFGGMIGVTLFGIVLTPVFFVIVDWFSELSFRNRYTRSLAIALTAL
VSLDFARYTARWIGGRFKKVKLNPRNPK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttcgctttttcatagataggccgatattcgcgacggtgttgtcgatagtcatc
tctatcgccggggcgctcgcggtaccgacattgcctctttcgcaatatccccccgttacc
ccgccgacgattcagatcgattgcaactatccgggagcgagcgcccaggtcgttgcggaa
acgattgccgcccccatcgaacagcaggtcaacggcgttgaacgcatgctgtatatgact
tcgcaatccacttcggatgggtcctatacctgtacggtcactttcgatattggcacgcgg
ttgaattttgcccaagttctggtccaaaatcgggtcaatctggcacttcccaatctcccg
gatgtcgtgaaagcgaccggggtaacgacgcgtaagcgttcgcccgaaattcttctgacg
gtaagcctgaactcccccgatcagagctataaccagctttatctcagtaattacgccttt
atccgcatcaaggacgaactggcccgcttaccgggcatcagcgatgtgacgctctttggc
cagcgcgactatgcgatgcgggtctggatcgataacgacaagttggccagtcgaaatctg
accgcgattgatgtcgtgaatgctctgcaggaacagaatgcccaggtcgcggcgggacag
atcggtcagcctccaaatcccggcctgcaaacgacccaattgaccctgagcacactcggt
cggttaaagacgcccgaacaattcggcgaagtaatcattaaggccacttcagagggtaaa
gtcgtcaaacttcgcgatgtggctcgcttggaattgggcgcgaaaaacgaggatgtttcg
aatactttcgatcacaagcagaccatcggcctggcggtattcctcttaacgggggcgaat
gctctggaaaccggggatctcgttaaagaagccatggagcggatggccaaggacttcccg
gagggcatgatttatgaaatcggttacgatacaacgcctttcattcgcgaatccatcaac
gaagttttcaaagccctgcgcgatgctattctgctcgtggccatcgtagtactggtcttt
ctccaaagctggcgggcatcgatcattccgctggcggctgtgcccgtggccattatcggt
accttcggagcgatgtggttattcggctactccttgaataacctcaccctatttggtttg
gttctcgcggtcgggatcgtcgtggacgatgccattgtggtggtggaggccgtgcagcac
catattgagcgcggccttgcccccaaagcggcgaccatccgagccatggaagaagtgacc
gggccggttatcgcagtcggcgtggtgctggccgcggtcttcgtaccctgtatgttcctt
tcgggtgtggtcggacaattcttccggcagtttgccatcaccatcgccgtctcgactctg
atctcgaccttcaactctctcactctcagtccggctctcgcggcgttgctgctacgctct
ccggattccaagcccgatccgatcacctgcgtgatcaattttttcttcggctggtttttc
aaaattttcaactgggcatttcacaagctgggagttggttacgtccgtaccgtgtcggcg
gccattagagtgcccgcgctcgctctgtttctatacggcggcatgattgctctgggcggt
atggaactgcaaggtttatcgagctttctgccgaaaagttacatcccgaagtttgtttct
gccaaggaagcgggtttgccgacgggctttattcccatgcaggataaaggctatctgatt
gccagcgtacaactgcccgattcttcggcagccgaacgcagtaagaagatcctcgatcgc
gttgccgaaatcgctctggaaactcccggtgtgaagcatgtcaacgctgtggcgggcaac
tcgttcgtgctgagtgcctacgggtccaacttcggttccatgtttatcattctcgatcag
tttgccaatcgaaaaggaaagcccgatctgtatgccgatgtcattatggcccggctccgg
caacgtgtgacgtccgaaattccggaagcgcaaattgccatcttcggcgcccctcccgtt
tcggggttgggccgtgccggcggtttccgagtgatgattgaagatcgcggaggcaatggc
ccgaaagttctggagcgtgaaactctcaacatgatttccaaaggaaatcaacagcccggt
ctgaccggtttgtttaccgtctatgccacgaattcgccgcagctcttcctggatgtggat
cgtaccgcctgcatggcccgcggcctcgatctcaattcggtgttcggcacccttcaggca
accatgggagctcagtacgtcaacgacttcaatttgttcggccgaacctggcaggtgaac
gttcaatcggagcaacaactccgatccaaagtggaggatgtcggacatatcaaagttcga
aatcgcaacggcgatatgatcccattaggtgccgtggtcaaagtggtgccggcggccggt
cctctagtcatcacccgacacaacatgtacccggccgctccgatcaacgggaacgtggcc
ccgggttacagcaccggcgaggcgtattcgatgttcacggcgctggccaatcaggaatta
caaggcagcatggccttcgaatggtcggaacttgccttcatcgaacagaaatcggcgagt
agtgctctgaagattttcggcctgtccgtcattttcgtcttcctggcactagcagccctc
tatgagagttggatgctgcctctggcagtaattctcgttgtaccggtttgcgtggtcggc
tccctggtggccgtggatgtcgcaaatcaggatgtaaacatcttcactcaggtcggcttc
gtggttctggtcggactcgcgtgcaaaaatgcgattctgatcgtggaatttgccaagctt
tcgcgcgaacggggtaagtcgagaaggcaagccgtgctcgatgcctgttacctgcgtttc
cgcccgattctgatgacttccgtggctttcatcctcggagtgctgccgctgctgatatcg
accggagccggggcagaaatgcgcaaagctctggggacagccgtgttcggcggcatgatc
ggtgtaacgctgttcggtatcgtgctgacgccggtgtttttcgtaatcgtcgactggttc
agcgaactcagcttccggaatcgttacacccggagtctggcaatcgcgctgaccgcttta
gtttcgttggatttcgcaaggtataccgcacggtggattggcgggcggttcaagaaggtg
aaactcaatccgcgaaatcctaaatga
DBGET
integrated database retrieval system
