KEGG   Thamnophis sirtalis (common garter snake): 106537822
Entry
106537822         CDS       T06107                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03420  Nucleotide excision repair
tsr04110  Cell cycle
tsr04114  Oocyte meiosis
tsr04120  Ubiquitin mediated proteolysis
tsr04141  Protein processing in endoplasmic reticulum
tsr04310  Wnt signaling pathway
tsr04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106537822 (RBX1)
   04120 Ubiquitin mediated proteolysis
    106537822 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106537822 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    106537822 (RBX1)
   04350 TGF-beta signaling pathway
    106537822 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    106537822 (RBX1)
   04114 Oocyte meiosis
    106537822 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsr04121]
    106537822 (RBX1)
   03400 DNA repair and recombination proteins [BR:tsr03400]
    106537822 (RBX1)
Enzymes [BR:tsr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     106537822 (RBX1)
Ubiquitin system [BR:tsr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   106537822 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     106537822 (RBX1)
   Cul2 complex
     106537822 (RBX1)
   Cul3 complex
     106537822 (RBX1)
   Cul4 complex
     106537822 (RBX1)
   Cul7 complex
     106537822 (RBX1)
   Cul8 complex
     106537822 (RBX1)
   Cul9 complex
     106537822 (RBX1)
DNA repair and recombination proteins [BR:tsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      106537822 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      106537822 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 106537822
NCBI-ProteinID: XP_013907556
UniProt: A0A6I9WZK5
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggctgccgcgatggatgttgatactccgagtgggaccaacagcggtgccggtaaaaag
cgcttcgaagtaaagaagtggaatgcagttgccctctgggcttgggacatcgttgttgac
aactgtgcaatatgcagaaatcatattatggatctctgtatagaatgccaagctaaccaa
gcatcagctacctcggaagaatgcactgttgcatggggtgtttgtaatcacgctttccat
tttcattgcatttcccgctggcttaagactcggcaggtatgcccattagataatcgagaa
tgggagtttcagaagtatggacattag

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