Thamnophis sirtalis (common garter snake): 106538397
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Entry
106538397 CDS
T06107
Symbol
LEMD3
Name
(RefSeq) inner nuclear membrane protein Man1 isoform X1
KO
K19410
inner nuclear membrane protein Man1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106538397 (LEMD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106538397 (LEMD3)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
106538397 (LEMD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
106538397
NCBI-ProteinID:
XP_013908348
UniProt:
A0A6I9XAW7
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MAAATAAQLTDEELFSELKRLGFSPGPVTESTRPVYVKKLKKLREEERTSGAHGVVANKT
RNSSNNTPGAGGGGGGGLRVRLGSPDLSPLSGVIGGGGIRARTTPFGGGGGKVLLGFSSD
ESDVEASPRGQPGAAASRRERVSTSRRDPRPAGASAAASCLNHSALAESPARRKPNAWWG
ATARRATVTAGTPEQMEGGRATGDEEDAQKEEAERRRERHKSRAVNGNRLLTGGTNMRDQ
YSDSEEEDEAAATQQGPKEEPFTRHSVCRKNLCKSLSPFSARRGVAAGDGLLEAGQGQGS
AVSGGFAGNVRAAGGSKTAERADRREDDEEEEEEILSARGDGDYLDSSPRSPRYSGSSSK
KGNPLLLPPLLPDTDHSKITDPLSSSRKRANNHILPDAIGGYNTEPSIYSASSLVSGAIS
SSSTRINHSNHTGSNHTYLKNSYNPKLSEPEEDLLQQFKREEISTTGNFSAHYLSMFLLT
AACLFFLVLGFTYLRMRGSGIAENMRIENNNPTIGEPNVDQPILMNCLYRLHEKLAQMAG
DHECGNSVKKGLSIQEAATYLKNLGPEYENAFNESLQWLLNSGEDVGIKYVGNSSDEESI
TDITDIKYLVSTRPQMTLTCRFRRAFITATCRSFILLIGIGIIWGVIKYMKYRWYKEEEE
TRQMYDMIVKIIDILRSHNEACQENKELQPYMPIPHVRDSLIAPKDRKKMEKVWKRSVDF
LAANESRVRTETRRVGGADFLVWKWIQPSASCDKMLIMPSKVWQGQAFHLDRRNSPPNSL
TPCLKIRNMFDPVMEIGDHWHLAIQEAILEKCSDNEGIVHIAVDKNSREGCVYVKCLSPE
YAGKAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQATACSAPLKPSNTHMNSMSHLRLRT
GTANNQGNS
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccactgccgcgcagctcaccgatgaggagcttttctctgaactgaagcga
ctcggtttctcgccggggcccgtgacggaaagcaccaggccagtctacgtaaagaagctg
aagaaactgcgggaagaagagcggacgtctggggcccacggcgttgtcgccaacaagacc
cggaacagtagcaacaataccccaggggcaggcggcggcggcggcggcggcttgagggtt
cgcttgggcagtcccgacctctcgcctttgtccggagtgattggcgggggtggcatccgg
gcccgcacaactcccttcggcggaggcggtggcaaagtcctgctgggcttcagttccgac
gaatcggatgtggaggccagtcccaggggccagcctggcgccgctgccagccggagggaa
cgggtttcgacctctcgtcgggacccgaggcctgcgggcgcctccgccgccgcctcctgc
ctcaaccacagtgccttggcggagtcgccggctcgcaggaagcccaatgcctggtgggga
gcgacggctagacgggcgacggtcacggcggggactccggagcagatggagggcgggaga
gcgaccggggacgaggaagacgcccagaaagaggaggccgagcggaggcgggagcgacac
aagagccgagcagtgaacgggaataggctgctcaccggcggcacaaatatgagggaccag
tactcggactcggaggaagaggacgaggcggcggccacacagcaggggccgaaggaggag
cccttcactcgtcactctgtctgcaggaagaacctctgtaaatcgctcagccccttttcc
gctcgcagaggtgttgcggccggcgacggcttgctggaggcaggtcaagggcaaggctct
gcggtcagcggtggctttgcggggaacgtcagggccgccggcgggagtaaaaccgccgaa
agagcggacaggcgagaggacgacgaagaggaagaagaagaaatcctatcagccagagga
gatggcgattatctggactcgagtccgcgcagcccccgatacagcggcagttcttccaag
aaaggcaatccgctgttactgccgccactgctacctgacacggatcatagcaaaataact
gatcccttaagcagtagtaggaaacgggccaacaatcatattctccccgatgcaatcggg
ggctacaatactgaaccaagcatttatagtgctagcagcctagtttcaggtgctatcagc
tcatcatccactagaatcaatcactccaatcacacaggttccaatcatacctatttgaaa
aattcttacaatccaaagctttcggaacctgaagaggatctgttgcagcagtttaagaga
gaagaaatatccaccacaggaaatttcagtgctcattatttgtcgatgttcctcttaact
gctgcatgtttgttctttctggtgttgggattcacttacctgagaatgagaggttctgga
atagctgagaatatgagaattgagaataataatccaaccattggagaacccaatgtagac
caaccaattctcatgaactgtttatatagacttcatgaaaagttggcacaaatggcaggt
gatcatgaatgtggaaattctgtaaagaaggggctttccattcaagaagcagctacttat
ttaaaaaatttaggtccagaatatgaaaatgcatttaatgaatccctgcaatggttatta
aatagtggagaagatgttggtataaaatatgttggtaacagctcagatgaagagtctata
accgatataactgatataaagtatctagtatcaactaggccacagatgacccttacatgt
cgtttccgtcgtgcatttattactgcaacctgtagatcattcattctgctgataggtatt
ggaataatttggggagtcataaaatatatgaagtatagatggtacaaagaagaggaggag
accaggcaaatgtatgacatgattgtaaaaattatagatattctaagatctcacaatgaa
gcatgtcaggaaaacaaagaattacaaccatatatgcctattccccatgttcgagattct
ttgattgcaccaaaagacagaaaaaaaatggaaaaagtatggaaaagatctgttgatttc
cttgctgctaatgaatctagagttcgcacagaaacacgaagagtaggtggtgctgatttt
ctggtgtggaaatggatacagccatctgcatcatgtgataaaatgctaatcatgccatct
aaagtgtggcaaggtcaagcatttcatttagatagaagaaattcaccaccaaatagtttg
acaccttgcttaaagattcgcaatatgtttgatccagtaatggaaattggtgatcattgg
catttggctattcaagaagcaatcttggaaaagtgcagtgataatgagggaatagttcac
atagcagtggacaaaaattcacgagagggttgtgtgtatgtcaagtgtttatctccagaa
tatgctggaaaagcttttaaagcattgcacggatcttggtttgatggcaaattggtaaca
gtaaagtatctgcgattagatcggtatcatcatcgttttccacaggctactgcttgcagt
gcgcctctgaagccatcaaatacacatatgaactcaatgtctcatcttcgcctccggaca
ggcacagccaacaaccagggaaactcctga
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