Thamnophis sirtalis (common garter snake): 106538735
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Entry
106538735 CDS
T06107
Symbol
PSEN2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106538735 (PSEN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106538735 (PSEN2)
Peptidases and inhibitors [BR:
tsr01002
]
Aspartic peptidases
Family A22: presenilin family
106538735 (PSEN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
106538735
NCBI-ProteinID:
XP_013908802
UniProt:
A0A6I9XCB0
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MIAFMNNSDSEEEPCNERTSLMSAESPLLPSYHDGAQASEATETLSHRNRRPGSTSSSNK
AEGNGPDPERAAKGHIVLDNEEEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVRFYTE
KNGQLIYTPFSEDTPYVGQRLLSSVLNTLIMISVILVMTIFLVLLYKYRCYKFIHGWLIL
SSLMLLFLFTYIYLGEVLKTYNVAMDYPTLFFVIWNFGAVGMICIHWKGPLKLQQAYLIM
ISALMALVFIKYLPEWSAWVILGGISVYDLIAVLCPKGPLRMLVETAQERNEPIFPALIY
SSAMMWTIGMAKPDSAQRRSSQEIRDPEAETHDNSSYAEPEVPEMRNSTIDQTGQQLGQI
ACNVEESQEEEERGVKLGLGDFIFYSVLVGKAAATASGDWNTTLACFVAILIGLCLTLLL
LAVFKKALPALPISITFGLIFYFSTDYLMQPFMDTLAAHQLYI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccttcatgaacaattctgacagtgaagaggaaccttgcaatgaaaggacatca
ttgatgtcagctgaaagcccccttctgccttcttatcatgatggagcacaagcatcagaa
gctacagaaacactttcccacaggaatagacgtcctggcagcactagcagctctaataaa
gcggagggaaatgggcctgatccagaaagagcagcaaaaggacacattgtgctggataat
gaggaagaagagttgaccttaaaatatggagcaaagcacgtgatcatgctgtttgtgcct
gtaacactctgcatggttgtcgttgttgcaaccattaagtcagtccgtttttacactgag
aagaatgggcaactgatttatacccccttcagtgaagataccccctatgtgggccaacgt
ctcctgagctctgtgttgaataccctcattatgatcagtgttattctagtgatgacaatc
tttttggttctgctgtacaaatatcgttgctataagttcattcacgggtggctgattctc
tcatcgctgatgcttttgtttctcttcacttacatctatcttggcgaagtactcaagaca
tacaatgtggctatggattaccctaccctgttctttgtcatctggaattttggagcagtt
gggatgatttgcatccactggaaggggcctttgaaacttcagcaagcttatctcattatg
atcagtgccttgatggctttagttttcattaaatacttgccagagtggtcagcttgggtc
atcctgggaggaatctctgtttatgacttgatagcagttttatgtccaaagggacctctc
cgaatgttggtggaaacagcacaagagagaaatgagccaatatttcctgcacttatttat
tcctctgctatgatgtggacaataggaatggcaaagccagacagtgcccaaagaagatct
tctcaggagatacgggatccagaagcagagacccatgacaattcctcatatgctgagcct
gaagttccagaaatgagaaactcaactattgatcaaactggccaacaacttggtcaaatt
gcctgcaacgttgaggaaagccaagaggaggaagaaagaggagtcaagctgggtctagga
gactttatattctatagcgtgcttgtcggcaaagcagctgccactgctagtggggactgg
aatacaacattggcttgttttgtagccatcctcataggtctgtgcttaactcttctattg
cttgcagtctttaagaaggcactacctgctcttcccatttccatcacctttggcctgatc
ttctacttctcaacagattatctcatgcagcctttcatggacacccttgcagctcatcag
ttatatatctaa
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