Thamnophis sirtalis (common garter snake): 106538947
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Entry
106538947 CDS
T06107
Name
(RefSeq) exostosin-1
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
tsr01100
Metabolic pathways
Module
tsr_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
106538947
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsr01003
]
106538947
Enzymes [BR:
tsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
106538947
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
106538947
Glycosyltransferases [BR:
tsr01003
]
Glycan extension
O-Glycan
106538947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
106538947
NCBI-ProteinID:
XP_013909078
UniProt:
A0A6I9XD47
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MQAKKRYFTLLSAGTFVVLLFYLGGLQFRASRSQSRREARSSGGRNGLQRPERYWPRFPD
ALRPFLPWDQLESEDYNRHASPRQKRDANAGLYKGKKCRMESCFDFALCRKNGFKVYVYP
PQKGEKIAESYQNILAAVEGSRFYTSDPSQACLFVLGLDTLDRDQLSPQYVHNLRSKVQS
LHLWNNGRNHLVFNLYSGTWPDYTEDVGFDIGQAMLAKASISTENFRPKFDVSIPLFSKD
HPRTGGERGFLRFNTIPPLRKYMLVFKGKRYLTGIGSDTRNALYHVHNGEDVVLLTTCKH
GKDWQKHKDSRCDRDNAEYEKYDYREMLHNATFCLVPRGRRLGSFRFLEALQAACIPVML
SNGWELPFSEVINWNQAAVIGDERLLLQIPSTIRSIHQDKILALRQQTQFLWEAYFSSVE
KIVLTTLEIIQDRIFKHISRNSLIWNKHPGGLFVLPQYSSYLGDFPYYYANLGYP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgctacttcaccctcctctcggccggcaccttcgtcgtccttctc
ttctacttgggaggcttgcagttcagagcatccaggagccaaagcaggcgagaggcgcgc
agtagcggcggcaggaatggcttgcagcgccccgaacgctactggccccgcttcccggac
gccctgcgccctttcctgccttgggaccagctggagagcgaggattacaaccggcacgct
tcccctcgccagaagcgcgacgccaacgccggcctctacaagggcaagaagtgccgcatg
gagtcctgcttcgacttcgccctgtgcaggaaaaacggcttcaaggtctacgtctacccg
ccgcagaaaggggagaagatcgccgagagttaccaaaacatcctggccgcggtcgagggc
tcccgcttttatacttcggaccccagccaagcctgcctcttcgtcctcggcttggacacc
ttagaccgagaccagctctccccccagtacgtgcacaacctgcgctccaaagtgcaaagc
ctccacttgtggaacaacgggaggaatcatttagtttttaacttatattccggcacctgg
cctgactacaccgaggacgtgggcttcgacattggccaggccatgttggccaaagccagc
atcagtacggaaaacttccggcccaagtttgacgtctccatccctcttttttctaaggat
cacccaaggacaggaggggagaggggcttcttgaggtttaacaccatcccacctctgagg
aagtatatgttggtgttcaaagggaaaaggtacctaactgggataggatcagacaccagg
aatgccttatatcatgtccataatggggaagacgttgtcctgttgactacctgcaagcat
ggcaaagattggcagaagcacaaggattctcggtgtgatagggacaacgccgagtatgaa
aaatatgattatcgtgaaatgctgcacaatgccactttctgtctggtcccccgtggccgg
aggcttggatccttcaggttcttggaggccctgcaggctgcctgtattcctgtgatgctc
agcaatggatgggaacttccattctccgaagtgattaattggaatcaagctgccgtcata
ggagatgagagattgttattacagatcccttctacaatcaggtctatccatcaggataaa
atcctagcacttagacagcagacacagttcttgtgggaggcttatttttcttcagttgag
aagattgtattgaccacactagagattattcaagacagaatatttaagcacatatcccgt
aacagtttaatatggaacaaacatcccggggggttgttcgtactgccacagtattcatca
tatctgggagatttcccttactattatgctaacctagggtacccttaa
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