Thamnophis sirtalis (common garter snake): 106539196
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Entry
106539196 CDS
T06107
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106539196 (PKP1)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
106539196 (PKP1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
HEAT_EZ
Atx10homo_assoc
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
106539196
NCBI-ProteinID:
XP_013909403
UniProt:
A0A6I9XE59
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MLHSPLKTALAYECFQDQANSTLALPSDHKLKTRGTGKQRVQEQVLMTVKRQKQKSSLSS
ASNAAGHSNRGSMYDGLSDGYNYGTARGTYYAKAHTGTNNWGNTMYNGTLKRNAAENKRY
SSYSQMDGWGSKHYNKICSPTHAGSDYCFVQNMKSSRSEPDLYNDPPRGTLRRNQSGSRM
NHKASLHRNSLYSNTCNTQEGITTLTRSNKRIPIRTPSCASNKQDAVYAQPVASKPDAIY
GPGRSKICNDEVDYGAMTIQKAIQFLCSSDEKNQAMGAYFLQHTCFQDESAKQEVYRLGG
IAKLIELLRSSDENVQQASAGALRNLVFRNPANKLETRRQNGIRECVNLLRRTGNTEIQK
QLTGLLWNLSSTDELKEDLIHDALPVLTDRVIVPFSGWCDGIGNRTREIIDPEVFFNATG
CLRNLSSADAGRQTMRNYPGLIDSVMTYTQNCVAANQPDDKSVENCICILHNLSYRLDAE
VPNKYTHLNHLARNTHTDKSLTGCFNNRGKLEYDEYNLPLPEEDYKPKGSSWLYHSDAIR
TYLSLMEKSKKDATLEACAGALQNLTASRGMMSNAMSQIIALKEKGLPCIARLLQSNNAE
VVRSGTSLLSNMSRHSILHKTMAHQVLPDVTRLLALQAPGSSNYGDIMTSACYALRNLIM
YNPQMAKPYLTGSLINNVVGLCRNGSYPKAAEAARMLLSDIWSNRELQSVLKQQGYDKNM
MGSLTGSTLRTLSSRF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactctccactgaaaaccgctctggcatatgagtgcttccaagatcaggccaat
tcaactttagctttgccttcagatcacaagttaaaaacaagagggacaggaaaacaaagg
gtccaggaacaggtgttgatgaccgtcaagcggcagaagcaaaagtcctccctttcatca
gcatcaaatgcggcaggtcactccaaccgaggttcgatgtatgatggtttgtctgatggc
tataactatggaacagctcgtggtacctactatgccaaagcccacacaggaacaaataac
tggggcaatacgatgtacaatggaacactcaaaagaaatgcagctgagaacaaacgctac
agttcctacagccaaatggacggttggggtagcaagcattataacaagatctgtagtcct
acacatgctggcagcgactactgctttgtgcagaacatgaagagtagtcggagcgagcca
gacctctacaatgaccctccacgaggcacactaaggagaaatcagagtggaagccggatg
aatcacaaggccagtctacatcgtaacagcctctacagcaatacatgcaacacccaggaa
ggaattacaaccctaacaaggtcaaataagagaattccaatccgcaccccctcttgcgca
tctaacaagcaagatgcagtctatgcccagcctgtagccagcaagcctgatgcaatctac
ggaccaggtcgttccaaaatatgtaatgatgaagtggattatggagcaatgaccatccag
aaagccattcaattcctgtgttcctcagatgagaaaaatcaggccatgggtgcctacttc
ctccagcatacctgttttcaagatgaatctgccaagcaagaggtttaccgacttggaggc
attgccaagctgattgaacttctgcgcagttcagatgagaacgtgcagcaggcttcagct
ggggcccttcgaaacttagtcttcagaaatccagctaacaaattagaaacccgcaggcag
aatggaattcgagagtgtgtgaatctcctgaggaggactgggaacaccgaaatacagaag
cagttgacaggattgctctggaacctttcctccactgatgaactgaaagaagatctgata
cacgatgctcttccagtactcactgatcgtgttattgtacctttttctggatggtgtgat
ggtattggcaatagaacaagagaaattattgacccagaagttttcttcaatgccactggc
tgtttaaggaacttgagttctgcagatgctggacgtcaaaccatgagaaactacccagga
ttgattgactctgtgatgacatatacccagaattgtgtggcagctaaccagccagatgat
aagtctgtggagaactgtatctgtattcttcataatttgtcctaccgcctggatgctgaa
gtgccgaataaatacactcatcttaaccacttggccaggaacactcacacggacaaaagt
ttgacaggctgcttcaacaacagaggaaagctagagtatgatgaatataatctaccactt
cctgaagaggactataaacctaaaggttccagctggctgtaccattctgatgccatccgt
acctacctgtctttaatggaaaagagcaaaaaggatgccaccctggaagcatgcgctgga
gctctgcaaaatctgactgcaagcagaggaatgatgtcgaatgcaatgagccaaataatt
gccttaaaggagaaagggctgccctgcatagcacggctcctgcaatccaacaatgctgaa
gttgtccgatctggaacatctttactgagcaacatgtctcgacattctattctccacaaa
accatggctcaccaggtgcttccagatgtgactcgccttctagccctccaggctccaggt
tctagcaactatggagacattatgacatcagcttgctatgccctgaggaacttaatcatg
tacaacccacagatggccaaaccttacttgactggcagtttgataaataatgtagtaggc
ctgtgccgaaatggatcttaccccaaagcagctgaagcagctcgaatgctgctatctgat
atttggtcaaacagggaactccaatctgtactaaaacagcaaggatatgataagaacatg
atgggatctttaacaggaagcactctcaggactttgtcttccagattctaa
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